RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 CNNM4Q6P4Q7 775 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 EPM2AIP1Q7L775 607 aaPredicted RBP12.71□□□□□ -0.37
SKI-202ENST00000478223 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
SKI-202ENST00000478223 SUSD3Q96L08 255 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 SPATA32Q96LK8 384 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 RIPOR3Q96MK2 946 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 NECTIN4Q96NY8 510 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 SMOC2Q9H3U7 446 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 PCIF1Q9H4Z3 704 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 FAM13BQ9NYF5 915 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 KCNH3Q9ULD8 1083 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 UBQLN1Q9UMX0 589 aaKnown RBP12.71□□□□□ -0.37
SKI-202ENST00000478223 HPSEQ9Y251 543 aa12.71□□□□□ -0.37
SKI-202ENST00000478223 TICRRQ7Z2Z1 1910 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 WDR27A2RRH5 827 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 SPTLC1O15269 473 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 KLRC4O43908 158 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 TBC1D4O60343 1298 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 CYP3A5P20815 502 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 ROR1Q01973 937 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 RAB33AQ14088 237 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 MRPL58Q14197 206 aaKnown RBP12.7□□□□□ -0.38
SKI-202ENST00000478223 TMEM132DQ14C87 1099 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 KYAT1Q16773 422 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 ATAT1Q5SQI0 421 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 SLFN12LQ6IEE8 588 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 C15orf39Q6ZRI6 1047 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 UNC13DQ70J99 1090 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 FAM213AQ9BRX8 229 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 LRFN3Q9BTN0 628 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 GOLPH3LQ9H4A5 285 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 NUB1Q9Y5A7 615 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
SKI-202ENST00000478223 TIMM13Q9Y5L4 95 aaPredicted RBP12.7□□□□□ -0.38
SKI-202ENST00000478223 HELZP42694 1942 aaKnown RBP12.7□□□□□ -0.38
SKI-202ENST00000478223 COL4A2P08572 1712 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 M0QZQ0 153 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 SYN3O14994 580 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 TRAPPC3O43617 180 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 ZMYND10O75800 440 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 ASGR2P07307 311 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 C8AP07357 584 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 CMA1P23946 247 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 AARSP49588 968 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■■■■ 52.7
SKI-202ENST00000478223 NDUFA8P51970 172 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 ALCAMQ13740 583 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 FAM26FQ5R3K3 315 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 C9orf57Q5W0N0 161 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 ANKS3Q6ZW76 656 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 HDAC7Q8WUI4 952 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 SCFD1Q8WVM8 642 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 SMG7Q92540 1137 aaKnown RBP12.69□□□□□ -0.38
SKI-202ENST00000478223 PAGE5Q96GU1 130 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 PLEKHA4Q9H4M7 779 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 MAGEF1Q9HAY2 307 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 FBXL5Q9UKA1 691 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 EXOC7Q9UPT5 735 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 NR2E1Q9Y466 385 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 BACE2Q9Y5Z0 518 aa12.69□□□□□ -0.38
SKI-202ENST00000478223 CLUHO75153 1309 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 PTPRJQ12913 1337 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 FAM237AA0A1B0GTK4 181 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 ANO9A1A5B4 782 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 PIRO00625 290 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 CCL16O15467 120 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 TGFB1I1O43294 461 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 GPR37L1O60883 481 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 VNN2O95498 520 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 C1RP00736 705 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 SLFN14P0C7P3 912 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 ALADP13716 330 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 GARTP22102 1010 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 ARPP19P56211 112 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 LILRA4P59901 499 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 NTHL1P78549 312 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 AMPD3Q01432 767 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 BECN1Q14457 450 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 SLC8B1Q6J4K2 584 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 PDXDC1Q6P996 788 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 CCDC149Q6ZUS6 474 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 BRSK2Q8IWQ3 736 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 NELFCDQ8IXH7 590 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 TDRD5Q8NAT2 981 aaKnown RBP12.68□□□□□ -0.38
SKI-202ENST00000478223 BEST2Q8NFU1 509 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
SKI-202ENST00000478223 MYADMQ96S97 322 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 C1QTNF1Q9BXJ1 281 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 PRKD2Q9BZL6 878 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 LRRC27Q9C0I9 530 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 ASB7Q9H672 318 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 WDR6Q9NNW5 1121 aaKnown RBP12.68□□□□□ -0.38
SKI-202ENST00000478223 SLC39A2Q9NP94 309 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 HCFC1R1Q9NWW0 138 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 ZDHHC7Q9NXF8 308 aa12.68□□□□□ -0.38
SKI-202ENST00000478223 DERAQ9Y315 318 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms