RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 OTOP1Q7RTM1 612 aa2.53□□□□□ -2
CALD1-218ENST00000478075 GLB1L2Q8IW92 636 aa2.53□□□□□ -2
CALD1-218ENST00000478075 PBKQ96KB5 322 aa2.53□□□□□ -2
CALD1-218ENST00000478075 FAM234AQ9H0X4 552 aa2.53□□□□□ -2
CALD1-218ENST00000478075 KLC4Q9NSK0 619 aa2.53□□□□□ -2
CALD1-218ENST00000478075 AATKQ6ZMQ8 1374 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 TRBV23-1A0A0A0MS06 115 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 A0A1W2PS29 197 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 ANTXRLA6NF34 631 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 SMIM22K7EJ46 135 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 FGF3P11487 239 aaPredicted RBP2.52□□□□□ -2.01
CALD1-218ENST00000478075 RHCEP18577 417 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 HDLBPQ00341 1268 aaKnown RBP2.52□□□□□ -2.01
CALD1-218ENST00000478075 ZNF549Q6P9A3 640 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 VPS37DQ86XT2 251 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 C8orf58Q8NAV2 365 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 MDM1Q8TC05 714 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 HES6Q96HZ4 224 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 ASB2Q96Q27 587 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 ALG8Q9BVK2 526 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 ACBD3Q9H3P7 528 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 CAPN10Q9HC96 672 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 ST7Q9NRC1 585 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 USP25Q9UHP3 1055 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 NEU2Q9Y3R4 380 aa2.52□□□□□ -2.01
CALD1-218ENST00000478075 R3HCC1Q9Y3T6 440 aaKnown RBP2.52□□□□□ -2.01
CALD1-218ENST00000478075 ST20-MTHFSA0A0A6YYL1 179 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 WDR27A2RRH5 827 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 APOL3O95236 402 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 POMCP01189 267 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 PSG1P11464 419 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 GSPT1P15170 499 aaKnown RBP2.51□□□□□ -2.01
CALD1-218ENST00000478075 CELF2-AS1Q8N7Q2 184 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 CEP95Q96GE4 821 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 C5orf34Q96MH7 638 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 ORAI2Q96SN7 254 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 SPATA9Q9BWV2 254 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 GPRC5DQ9NZD1 345 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 COQ6Q9Y2Z9 468 aa2.51□□□□□ -2.01
CALD1-218ENST00000478075 MYPNQ86TC9 1320 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 CXorf49A8MYA2 514 aaPredicted RBP2.5□□□□□ -2.01
CALD1-218ENST00000478075 DIAPH1O60610 1272 aaKnown RBP2.5□□□□□ -2.01
CALD1-218ENST00000478075 TULP3O75386 442 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 EBLN1P0CF75 366 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 RPS7P62081 194 aaKnown RBP2.5□□□□□ -2.01
CALD1-218ENST00000478075 SRSF1Q07955 248 aaKnown RBP eCLIP2.5□□□□□ -2.01
CALD1-218ENST00000478075 ZNF174Q15697 407 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 MFSD14BQ5SR56 506 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 ZNF324BQ6AW86 544 aaPredicted RBP2.5□□□□□ -2.01
CALD1-218ENST00000478075 ZZZ3Q8IYH5 903 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 FANCBQ8NB91 859 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 PAWRQ96IZ0 340 aaKnown RBP2.5□□□□□ -2.01
CALD1-218ENST00000478075 CDC6Q99741 560 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 MYL10Q9BUA6 226 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 ZNF408Q9H9D4 720 aa2.5□□□□□ -2.01
CALD1-218ENST00000478075 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.5□□□□□ -2.01
CALD1-218ENST00000478075 A0A087WYN8 130 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 PRAMEF4O60810 478 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 ATP5F1P24539 256 aaPredicted RBP2.49□□□□□ -2.01
CALD1-218ENST00000478075 IL1R2P27930 398 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 CDC25AP30304 524 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 RAP2BP61225 183 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 E2F1Q01094 437 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 GTF2H3Q13889 308 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 PITRM1Q5JRX3 1037 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 CLNKQ7Z7G1 428 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 SLC30A5Q8TAD4 765 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 SLC35B2Q8TB61 432 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 MYCBPAPQ8TBZ2 947 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 NUP133Q8WUM0 1156 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 LPIN2Q92539 896 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 REPS1Q96D71 796 aa2.49□□□□□ -2.01
CALD1-218ENST00000478075 PRAMEF33A0A0G2JMD5 474 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 A0A1W2PNU3 283 aaPredicted RBP2.48□□□□□ -2.01
CALD1-218ENST00000478075 ADCY3O60266 1144 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 PRAMEF10O60809 474 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 PCDH8O95206 1070 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 NDUFB7P17568 137 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 TCEA1P23193 301 aaKnown RBP2.48□□□□□ -2.01
CALD1-218ENST00000478075 ME1P48163 572 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 VEGFCP49767 419 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 MGAT5Q09328 741 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 TMEM177Q53S58 311 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 FAM209AQ5JX71 171 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 PRAMEF14Q5SWL7 426 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 PNLDC1Q8NA58 520 aaKnown RBP2.48□□□□□ -2.01
CALD1-218ENST00000478075 B3GALNT2Q8NCR0 500 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 SNX33Q8WV41 574 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 HNRNPLLQ8WVV9 542 aaKnown RBP2.48□□□□□ -2.01
CALD1-218ENST00000478075 CCSER2Q9H7U1 834 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 PDGFCQ9NRA1 345 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 PI4KBQ9UBF8 816 aa2.48□□□□□ -2.01
CALD1-218ENST00000478075 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.47□□□□□ -2.01
CALD1-218ENST00000478075 ZBTB7CA1YPR0 619 aa2.47□□□□□ -2.01
CALD1-218ENST00000478075 DVL2O14641 736 aa2.47□□□□□ -2.01
CALD1-218ENST00000478075 ZNF432O94892 652 aa2.47□□□□□ -2.01
CALD1-218ENST00000478075 NGFRP08138 427 aa2.47□□□□□ -2.01
CALD1-218ENST00000478075 FAM163BP0C2L3 166 aa2.47□□□□□ -2.01
CALD1-218ENST00000478075 FPGSQ05932 587 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms