RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 TIPINQ9BVW5 301 aa12.84□□□□□ -0.35
CPSF7-211ENST00000477890 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.84□□□□□ -0.35
CPSF7-211ENST00000477890 OTOGLQ3ZCN5 2332 aa12.84□□□□□ -0.35
CPSF7-211ENST00000477890 ZNF292O60281 2723 aa12.83□□□□□ -0.35
CPSF7-211ENST00000477890 NCAM2O15394 837 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 TOM1L1O75674 476 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 PLS3P13797 630 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 FCARP24071 287 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 GUCY2CP25092 1073 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 CCR2P41597 374 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 MATR3P43243 847 aaKnown RBP eCLIP12.83□□□□□ -0.36
CPSF7-211ENST00000477890 SMTNP53814 917 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 SLC10A6Q3KNW5 377 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 CYP4A22Q5TCH4 519 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 IQCEQ6IPM2 695 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 ZNF852Q6ZMS4 543 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 HS6ST3Q8IZP7 471 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 SUMF1Q8NBK3 374 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 TMEM161BQ8NDZ6 487 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 APPL2Q8NEU8 664 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 SPIRE2Q8WWL2 714 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 DDX12PQ92771 950 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 DNASE1L2Q92874 299 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 ZNF512Q96ME7 567 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-211ENST00000477890 NELL2Q99435 816 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 PLIN2Q99541 437 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 NTPCRQ9BSD7 190 aaKnown RBP12.83□□□□□ -0.36
CPSF7-211ENST00000477890 BRD9Q9H8M2 597 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 TUBGCP4Q9UGJ1 667 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 MRPS17Q9Y2R5 130 aaKnown RBP12.83□□□□□ -0.36
CPSF7-211ENST00000477890 DCHS1Q96JQ0 3298 aa12.83□□□□□ -0.36
CPSF7-211ENST00000477890 NRG2O14511 850 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-211ENST00000477890 SPTLC1O15269 473 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 CLDN3O15551 220 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 MICAL2O94851 1124 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 CXCL8P10145 99 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 MAPTP10636 758 aaKnown RBP12.82□□□□□ -0.36
CPSF7-211ENST00000477890 MYL4P12829 197 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 CPB1P15086 417 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 MARCKSP29966 332 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-211ENST00000477890 RPS9P46781 194 aaKnown RBP12.82□□□□□ -0.36
CPSF7-211ENST00000477890 SPAG1Q07617 926 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 TWF1Q12792 350 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 ERICH6BQ5W0A0 696 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 TMEM130Q8N3G9 435 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 ATRIPQ8WXE1 791 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 CLDN23Q96B33 292 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 ASB16Q96NS5 453 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 KIF2CQ99661 725 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 TRMT61BQ9BVS5 477 aaKnown RBP12.82□□□□□ -0.36
CPSF7-211ENST00000477890 CEP72Q9P209 647 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 AFF4Q9UHB7 1163 aaKnown RBP12.82□□□□□ -0.36
CPSF7-211ENST00000477890 KCNG1Q9UIX4 513 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 NDRG2Q9UN36 371 aaKnown RBP12.82□□□□□ -0.36
CPSF7-211ENST00000477890 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 PCDHGA2Q9Y5H1 932 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 TICRRQ7Z2Z1 1910 aa12.82□□□□□ -0.36
CPSF7-211ENST00000477890 GJA1P17302 382 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 ATP2C1P98194 919 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-211ENST00000477890 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-211ENST00000477890 MCL1Q07820 350 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 FZD5Q13467 585 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 RILPL1Q5EBL4 403 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 HYIQ5T013 277 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 TSSK4Q6SA08 328 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 ZPBP2Q6X784 338 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 RNF19BQ6ZMZ0 732 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 DGLUCYQ7Z3D6 616 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 SYT2Q8N9I0 419 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-211ENST00000477890 IRF7Q92985 503 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 BICD1Q96G01 975 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 CDK5RAP3Q96JB5 506 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 ZSWIM3Q96MP5 696 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 PNMA5Q96PV4 448 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 ASAH2Q9NR71 780 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 ZSCAN32Q9NX65 697 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 NCDNQ9UBB6 729 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 MAFFQ9ULX9 164 aa12.81□□□□□ -0.36
CPSF7-211ENST00000477890 COL4A2P08572 1712 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 NPHP3-ACAD11A0A0J9YXS1 232 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 SHISA7A6NL88 538 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 MAN2B1O00754 1011 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 MOSPD3O75425 235 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 CLTAP09496 248 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 OR4Q2P0C623 313 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 PLA2G4BP0C869 781 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 PSMC3P17980 439 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 GDI1P31150 447 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 SLC12A3P55017 1021 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 YWHAHQ04917 246 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-211ENST00000477890 MTAPQ13126 283 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 PUM1Q14671 1186 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPSF7-211ENST00000477890 VITQ6UXI7 678 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 LEMD2Q8NC56 503 aa12.8□□□□□ -0.36
CPSF7-211ENST00000477890 ZBTB44Q8NCP5 570 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms