RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CLUHO75153 1309 aa23.64■■□□□ 1.38
COL9A3-211ENST00000477612 M0QZQ0 153 aa23.64■■□□□ 1.37
COL9A3-211ENST00000477612 MYBP10242 640 aa23.64■■□□□ 1.37
COL9A3-211ENST00000477612 AMPD3Q01432 767 aa23.64■■□□□ 1.37
COL9A3-211ENST00000477612 DNM1Q05193 864 aaKnown RBP23.64■■□□□ 1.37
COL9A3-211ENST00000477612 SIGLEC14Q08ET2 396 aa23.64■■□□□ 1.37
COL9A3-211ENST00000477612 FOXD4L6Q3SYB3 417 aaPredicted RBP23.64■■□□□ 1.37
COL9A3-211ENST00000477612 CRELD2Q6UXH1 353 aaPredicted RBP23.64■■□□□ 1.37
COL9A3-211ENST00000477612 FOXD4L3Q6VB84 417 aaPredicted RBP23.64■■□□□ 1.37
COL9A3-211ENST00000477612 CCDC65Q8IXS2 484 aa23.64■■□□□ 1.37
COL9A3-211ENST00000477612 STAMQ92783 540 aa23.64■■□□□ 1.37
COL9A3-211ENST00000477612 IKZF4Q9H2S9 585 aa23.64■■□□□ 1.37
COL9A3-211ENST00000477612 TBC1D7Q9P0N9 293 aa23.64■■□□□ 1.37
COL9A3-211ENST00000477612 ZNF318Q5VUA4 2279 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 H7C4K7 107 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 ABLIM3O94929 683 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 GCNT3O95395 438 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 C8AP07357 584 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 PAX3P23760 479 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 ACOT2P49753 483 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 CASP5P51878 434 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 LIN9Q5TKA1 542 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 RESP18Q5W5W9 173 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 ZNF461Q8TAF7 563 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 MAGEF1Q9HAY2 307 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 LIMD1Q9UGP4 676 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 PCDHB8Q9UN66 801 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 ZDHHC9Q9Y397 364 aa23.63■■□□□ 1.37
COL9A3-211ENST00000477612 N4BP1O75113 896 aaKnown RBP23.62■■□□□ 1.37
COL9A3-211ENST00000477612 GARTP22102 1010 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 MCM4P33991 863 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 JADE1Q6IE81 842 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 HFE2Q6ZVN8 426 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 UBALD2Q8IYN6 164 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 APPL2Q8NEU8 664 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 BEST2Q8NFU1 509 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 POMGNT1Q8WZA1 660 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 DHX58Q96C10 678 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 ASIC4Q96FT7 647 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 C7orf25Q9BPX7 421 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 FGFBP2Q9BYJ0 223 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 TMEM206Q9H813 350 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 PIDD1Q9HB75 910 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 C2CD2Q9Y426 696 aa23.62■■□□□ 1.37
COL9A3-211ENST00000477612 TMEM221A6NGB7 291 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 M0R296 226 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 POLR2DO15514 142 aaKnown RBP23.61■■□□□ 1.37
COL9A3-211ENST00000477612 LDHAP00338 332 aaKnown RBP23.61■■□□□ 1.37
COL9A3-211ENST00000477612 ME1P48163 572 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 ROR1Q01973 937 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 PPM1LQ5SGD2 360 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 TMEM130Q8N3G9 435 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 EPS15L1Q9UBC2 864 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 RAPGEFL1Q9UHV5 662 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 FBXL5Q9UKA1 691 aa23.61■■□□□ 1.37
COL9A3-211ENST00000477612 ANO9A1A5B4 782 aa23.6■■□□□ 1.37
COL9A3-211ENST00000477612 WDR27A2RRH5 827 aa23.6■■□□□ 1.37
COL9A3-211ENST00000477612 PIRO00625 290 aa23.6■■□□□ 1.37
COL9A3-211ENST00000477612 MTMR3Q13615 1198 aa23.6■■□□□ 1.37
COL9A3-211ENST00000477612 NT5DC4Q86YG4 428 aa23.6■■□□□ 1.37
COL9A3-211ENST00000477612 FAM212AQ96EL1 285 aa23.6■■□□□ 1.37
COL9A3-211ENST00000477612 OXCT2Q9BYC2 517 aaPredicted RBP23.6■■□□□ 1.37
COL9A3-211ENST00000477612 FAM13BQ9NYF5 915 aa23.6■■□□□ 1.37
COL9A3-211ENST00000477612 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.6■■□□□ 1.37
COL9A3-211ENST00000477612 OAZ2O95190 189 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 NFICP08651 508 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 ATF2P15336 505 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 GUCY2FP51841 1108 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 LILRA4P59901 499 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 EHHADHQ08426 723 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 TMEM132DQ14C87 1099 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 TPGS2Q68CL5 300 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 ZNF280DQ6N043 979 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 SLC7A14Q8TBB6 771 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 MFSD14AQ96MC6 490 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 PYM1Q9BRP8 204 aaKnown RBP23.59■■□□□ 1.37
COL9A3-211ENST00000477612 IGSF9Q9P2J2 1179 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 MAFFQ9ULX9 164 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 HCN4Q9Y3Q4 1203 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 TSC2P49815 1807 aa23.59■■□□□ 1.37
COL9A3-211ENST00000477612 ARHGEF37A1IGU5 675 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 XYLBO75191 536 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 PRPF6O94906 941 aaKnown RBP23.58■■□□□ 1.37
COL9A3-211ENST00000477612 IL18RAPO95256 599 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 ASGR2P07307 311 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 CTXN3Q4LDR2 81 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 C9orf57Q5W0N0 161 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 STXBP4Q6ZWJ1 553 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 EPM2AIP1Q7L775 607 aaPredicted RBP23.58■■□□□ 1.37
COL9A3-211ENST00000477612 TCEAL8Q8IYN2 117 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 SYCP3Q8IZU3 236 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 MYADMQ96S97 322 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 KCNK12Q9HB15 430 aa23.58■■□□□ 1.37
COL9A3-211ENST00000477612 ZFP37Q9Y6Q3 630 aaPredicted RBP23.58■■□□□ 1.37
COL9A3-211ENST00000477612 PPEF2O14830 753 aa23.57■■□□□ 1.36
COL9A3-211ENST00000477612 KIAA0391O15091 583 aaKnown RBP23.57■■□□□ 1.36
COL9A3-211ENST00000477612 EIF3DO15371 548 aaKnown RBP eCLIP23.57■■□□□ 1.36
COL9A3-211ENST00000477612 TYMPP19971 482 aa23.57■■□□□ 1.36
COL9A3-211ENST00000477612 YWHAHQ04917 246 aaPredicted RBP23.57■■□□□ 1.36
COL9A3-211ENST00000477612 UNC13DQ70J99 1090 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms