RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 PTPN21Q16825 1174 aa18.2■□□□□ 0.5
EPHB4-204ENST00000477446 FKBP15Q5T1M5 1219 aa18.2■□□□□ 0.5
EPHB4-204ENST00000477446 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
EPHB4-204ENST00000477446 PARD3BQ8TEW8 1205 aa18.2■□□□□ 0.5
EPHB4-204ENST00000477446 C18orf25Q96B23 403 aaPredicted RBP18.2■□□□□ 0.5
EPHB4-204ENST00000477446 CNOT6LQ96LI5 555 aaKnown RBP18.2■□□□□ 0.5
EPHB4-204ENST00000477446 TSPAN18Q96SJ8 248 aa18.2■□□□□ 0.5
EPHB4-204ENST00000477446 POP1Q99575 1024 aaKnown RBP18.2■□□□□ 0.5
EPHB4-204ENST00000477446 DNAJB4Q9UDY4 337 aa18.2■□□□□ 0.5
EPHB4-204ENST00000477446 DERAQ9Y315 318 aa18.2■□□□□ 0.5
EPHB4-204ENST00000477446 C2CD2Q9Y426 696 aa18.2■□□□□ 0.5
EPHB4-204ENST00000477446 ARHGEF15O94989 841 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 DLATP10515 647 aaKnown RBP18.19■□□□□ 0.5
EPHB4-204ENST00000477446 PRKCSHP14314 528 aaPredicted RBP18.19■□□□□ 0.5
EPHB4-204ENST00000477446 DLG4P78352 724 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 SOX4Q06945 474 aaPredicted RBP18.19■□□□□ 0.5
EPHB4-204ENST00000477446 DSC1Q08554 894 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 FIGNQ5HY92 759 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 LMBRD2Q68DH5 695 aaPredicted RBP18.19■□□□□ 0.5
EPHB4-204ENST00000477446 CYP26C1Q6V0L0 522 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 COLGALT2Q8IYK4 626 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 CPLX3Q8WVH0 158 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 FAM84AQ96KN4 292 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 FAM193BQ96PV7 902 aaPredicted RBP18.19■□□□□ 0.5
EPHB4-204ENST00000477446 FNBP1Q96RU3 617 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 SLC38A7Q9NVC3 462 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 MSRAQ9UJ68 235 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 CAPN11Q9UMQ6 739 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 PTPRJQ12913 1337 aa18.19■□□□□ 0.5
EPHB4-204ENST00000477446 NLRC5Q86WI3 1866 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 LINC01553A4QN01 128 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 ZC3H11AO75152 810 aaKnown RBP eCLIP18.18■□□□□ 0.5
EPHB4-204ENST00000477446 GNA14O95837 355 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 LINC00271P0C7V0 271 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 KRT13P13646 458 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 VAMP7P51809 220 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 MCCD1P59942 119 aaPredicted RBP18.18■□□□□ 0.5
EPHB4-204ENST00000477446 BFSP1Q12934 665 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 TUSC3Q13454 348 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 CCDC40Q4G0X9 1142 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 NT5DC4Q86YG4 428 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 TMEM130Q8N3G9 435 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 OR8K1Q8NGG5 319 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 TMC2Q8TDI7 906 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 CLP1Q92989 425 aaKnown RBP18.18■□□□□ 0.5
EPHB4-204ENST00000477446 ERGIC2Q96RQ1 377 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 CGRRF1Q99675 332 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 NKX2-4Q9H2Z4 354 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 GOLGA2P5Q9HBQ8 144 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 ABHD10Q9NUJ1 306 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 CACNG4Q9UBN1 327 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 TUBGCP4Q9UGJ1 667 aa18.18■□□□□ 0.5
EPHB4-204ENST00000477446 UBQLN1Q9UMX0 589 aaKnown RBP18.18■□□□□ 0.5
EPHB4-204ENST00000477446 LUC7L2Q9Y383 392 aaKnown RBP18.18■□□□□ 0.5
EPHB4-204ENST00000477446 TRIOBPQ9H2D6 2365 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 LRRIQ3A6PVS8 624 aaPredicted RBP18.17■□□□□ 0.5
EPHB4-204ENST00000477446 TNNI1P19237 187 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 DNAJB2P25686 324 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 KRT9P35527 623 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 FXR1P51114 621 aaKnown RBP eCLIP18.17■□□□□ 0.5
EPHB4-204ENST00000477446 CLDN10P78369 228 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 TFAMQ00059 246 aaKnown RBP18.17■□□□□ 0.5
EPHB4-204ENST00000477446 C1orf220Q5T0J3 134 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 SPOUT1Q5T280 376 aaKnown RBP18.17■□□□□ 0.5
EPHB4-204ENST00000477446 SYT10Q6XYQ8 523 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 FRMD5Q7Z6J6 570 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 WDR49Q8IV35 697 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 OR5B17Q8NGF7 314 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 ZNF516Q92618 1163 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 L2HGDHQ9H9P8 463 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 METTL14Q9HCE5 456 aaKnown RBP18.17■□□□□ 0.5
EPHB4-204ENST00000477446 ARMCX3Q9UH62 379 aaPredicted RBP18.17■□□□□ 0.5
EPHB4-204ENST00000477446 CASTOR2A6NHX0 329 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 XPOTO43592 962 aaKnown RBP18.17■□□□□ 0.5
EPHB4-204ENST00000477446 TRIM49P0CI25 452 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 TRIM49CP0CI26 452 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 CYP3A5P20815 502 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 PBX3P40426 434 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 GUCY2FP51841 1108 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 MARSP56192 900 aaKnown RBP18.17■□□□□ 0.5
EPHB4-204ENST00000477446 BCAR1P56945 870 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 MAN2A1Q16706 1144 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 TRIM65Q6PJ69 517 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 SPRED2Q7Z698 418 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 BEST2Q8NFU1 509 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 RABGGTAQ92696 567 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 PAAF1Q9BRP4 392 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 MTMR12Q9C0I1 747 aa18.17■□□□□ 0.5
EPHB4-204ENST00000477446 A0A1W2PQJ5 194 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 PES1O00541 588 aaKnown RBP18.16■□□□□ 0.5
EPHB4-204ENST00000477446 ALDH2P05091 517 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 GALTP07902 379 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 TMEM191BP0C7N4 346 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 LAG3P18627 525 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 SLC11A1P49279 550 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 CLCNKBP51801 687 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 TAP1Q03518 808 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 ENPEPQ07075 957 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 DUOXA2Q1HG44 320 aa18.16■□□□□ 0.5
EPHB4-204ENST00000477446 VWA3BQ502W6 1294 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms