RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 BBC3Q96PG8 261 aaPredicted RBP10.78□□□□□ -0.68
COL4A5-204ENST00000477429 NELL2Q99435 816 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 TMEM60Q9H2L4 133 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 SMOC1Q9H4F8 434 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 AVENQ9NQS1 362 aaPredicted RBP10.78□□□□□ -0.68
COL4A5-204ENST00000477429 ANKEF1Q9NU02 776 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
COL4A5-204ENST00000477429 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 GDE1Q9NZC3 331 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 GMEB2Q9UKD1 530 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 BACE2Q9Y5Z0 518 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 PIAS3Q9Y6X2 628 aa10.78□□□□□ -0.68
COL4A5-204ENST00000477429 TMEM189-UBE2V1I3L0A0 370 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 TM4SF5O14894 197 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 MED24O75448 989 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 PRKCBP05771 671 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 CCNE1P24864 410 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 GDI1P31150 447 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 ARPP19P56211 112 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 NCBP1Q09161 790 aaKnown RBP10.77□□□□□ -0.69
COL4A5-204ENST00000477429 FAM187BQ17R55 369 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 STXBP5Q5T5C0 1151 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 GALNT17Q6IS24 598 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 SLC8B1Q6J4K2 584 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 PKN3Q6P5Z2 889 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 MAMSTRQ6ZN01 415 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 HACE1Q8IYU2 909 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 TTC8Q8TAM2 541 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 NETO1Q8TDF5 533 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 FAM3CQ92520 227 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 ZNF274Q96GC6 653 aaPredicted RBP10.77□□□□□ -0.69
COL4A5-204ENST00000477429 MFRPQ9BY79 579 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 BRD9Q9H8M2 597 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 SPTA1P02549 2419 aa10.77□□□□□ -0.69
COL4A5-204ENST00000477429 ADAMTS20P59510 1910 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 DOPEY1Q5JWR5 2465 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 KALRNO60229 2985 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 SMIM28A0A1B0GU29 152 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 PTPN2P17706 415 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 TXKP42681 527 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 PRPF4BQ13523 1007 aaKnown RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 SIM2Q14190 667 aaPredicted RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 CSRP2Q16527 193 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 ECM1Q16610 540 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 CATSPER3Q86XQ3 398 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 FAM160A2Q8N612 972 aaPredicted RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 CELF5Q8N6W0 485 aaKnown RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 ZNF461Q8TAF7 563 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 SECISBP2LQ93073 1101 aaKnown RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 C18orf25Q96B23 403 aaPredicted RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 BORCS6Q96GS4 357 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 MTMR9Q96QG7 549 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 TRMT61BQ9BVS5 477 aaKnown RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 LRRC3Q9BY71 257 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 FAM126AQ9BYI3 521 aaPredicted RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 CRISPLD1Q9H336 500 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 PRMT7Q9NVM4 692 aaPredicted RBP10.76□□□□□ -0.69
COL4A5-204ENST00000477429 FBXL5Q9UKA1 691 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 INSL5Q9Y5Q6 135 aa10.76□□□□□ -0.69
COL4A5-204ENST00000477429 ACKR2O00590 384 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 CPLX1O14810 134 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 N4BP3O15049 544 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 NCAM2O15394 837 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 MARCH6O60337 910 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 CXCL12P48061 93 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 PXNP49023 591 aaPredicted RBP10.75□□□□□ -0.69
COL4A5-204ENST00000477429 CDR1P51861 262 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 FOSBP53539 338 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 ELAVL2Q12926 359 aaKnown RBP10.75□□□□□ -0.69
COL4A5-204ENST00000477429 PTGDRQ13258 359 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 MRPL58Q14197 206 aaKnown RBP10.75□□□□□ -0.69
COL4A5-204ENST00000477429 TEAD2Q15562 447 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 ALKAL1Q6UXT8 129 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 TCEAL8Q8IYN2 117 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 SHKBP1Q8TBC3 707 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 ZSCAN18Q8TBC5 510 aaPredicted RBP10.75□□□□□ -0.69
COL4A5-204ENST00000477429 ZFYVE19Q96K21 471 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 PRIMPOLQ96LW4 560 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 MKNK1Q9BUB5 465 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 CYP4F11Q9HBI6 524 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 ZFP14Q9HCL3 533 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 TPCN1Q9ULQ1 816 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 PCDHA12Q9UN75 941 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 MRPS17Q9Y2R5 130 aaKnown RBP10.75□□□□□ -0.69
COL4A5-204ENST00000477429 ABCA12Q86UK0 2595 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 TRIP11Q15643 1979 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 LAMA1P25391 3075 aa10.75□□□□□ -0.69
COL4A5-204ENST00000477429 CFAP46Q8IYW2 2715 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 MYO9AB2RTY4 2548 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 SLC38A8A6NNN8 435 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 HEPACAM2A8MVW5 462 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 MAN2B1O00754 1011 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 ABLIM1O14639 778 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 PRRG1O14668 218 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 AXIN1O15169 862 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 EXTL3O43909 919 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 LARGE1O95461 756 aa10.74□□□□□ -0.69
COL4A5-204ENST00000477429 LRG1P02750 347 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms