RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TBC1D16Q8TBP0 767 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 MED15Q96RN5 788 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 LATS2Q9NRM7 1088 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 FAM187AA6NFU0 413 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 C11orf96Q7Z7L8 435 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 KIAA2013Q8IYS2 634 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 EEF2KO00418 725 aaKnown RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 TCF3P15923 654 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 PDGFRAP16234 1089 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 ABCE1P61221 599 aaKnown RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 KHDRBS2Q5VWX1 349 aaKnown RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 KDM1AO60341 852 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 OSBPL5Q9H0X9 879 aaPredicted RBP19.49■□□□□ 0.71
VARS2-209ENST00000477288 ARHGEF38Q9NXL2 777 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 ZBTB12Q9Y330 459 aaPredicted RBP19.49■□□□□ 0.71
VARS2-209ENST00000477288 PFASO15067 1338 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 DGAT1O75907 488 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 FKBP9O95302 570 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 GUCA1CO95843 209 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 MYBP10242 640 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 PGM1P36871 562 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 FKBP9P1Q75LS8 142 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 SEPT1Q8WYJ6 367 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 PRMT1Q99873 361 aaKnown RBP19.49■□□□□ 0.71
VARS2-209ENST00000477288 ADGRA2Q96PE1 1338 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 C19orf81C9J6K1 198 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 GSNP06396 782 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 TWF1Q12792 350 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 ALX1Q15699 326 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 MTHFD1LQ6UB35 978 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 ZNF556Q9HAH1 456 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 H2AFY2Q9P0M6 372 aaPredicted RBP19.49■□□□□ 0.71
VARS2-209ENST00000477288 ADAM21Q9UKJ8 722 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 ZNF711Q9Y462 761 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 PCDHB7Q9Y5E2 793 aa19.49■□□□□ 0.71
VARS2-209ENST00000477288 TTC26A0AVF1 554 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 SUPT3HB4E1H0 165 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 SLC25A41Q8N5S1 370 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 CD274Q9NZQ7 290 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 STXBP3O00186 592 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 AKAP10O43572 662 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 TBL3Q12788 808 aaKnown RBP19.48■□□□□ 0.71
VARS2-209ENST00000477288 TKFCQ3LXA3 575 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 ARMC6Q6NXE6 501 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 CHMP1BQ7LBR1 199 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 CLEC4FQ8N1N0 589 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 PLEKHA8Q96JA3 519 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 WWP1Q9H0M0 922 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 CAPN10Q9HC96 672 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 GGA3Q9NZ52 723 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 TULP4Q9NRJ4 1543 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 SPHKAPQ2M3C7 1700 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 TEX33O43247 280 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 ZNF189O75820 626 aaPredicted RBP19.48■□□□□ 0.71
VARS2-209ENST00000477288 MAP3K7CLP57077 242 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 GLB1LQ6UWU2 654 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 PKD2L2Q9NZM6 624 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 PSMD3O43242 534 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 MAGEA9P43362 315 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 NCOA4Q13772 614 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 PLD3Q8IV08 490 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 SRBD1Q8N5C6 995 aaKnown RBP19.48■□□□□ 0.71
VARS2-209ENST00000477288 EHD2Q9NZN4 543 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 DAGLAQ9Y4D2 1042 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 SOAT1P35610 550 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 EMC2Q15006 297 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 C12orf60Q5U649 245 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 FMR1NBQ8N0W7 255 aaPredicted RBP19.48■□□□□ 0.71
VARS2-209ENST00000477288 HPS3Q969F9 1004 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 DNAJC7Q99615 494 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 ASCC2Q9H1I8 757 aaPredicted RBP19.48■□□□□ 0.71
VARS2-209ENST00000477288 TNS3Q68CZ2 1445 aa19.48■□□□□ 0.71
VARS2-209ENST00000477288 KIAA0391O15091 583 aaKnown RBP19.47■□□□□ 0.71
VARS2-209ENST00000477288 ENO3P13929 434 aaPredicted RBP19.47■□□□□ 0.71
VARS2-209ENST00000477288 ATP6V1G3Q96LB4 118 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 TIPINQ9BVW5 301 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 GRAP2O75791 330 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 EPB42P16452 691 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 SLC1A1P43005 524 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 USP10Q14694 798 aaKnown RBP19.47■□□□□ 0.71
VARS2-209ENST00000477288 RABGAP1LQ5R372 815 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 STRIP1Q5VSL9 837 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 RINLQ6ZS11 566 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 RCOR2Q8IZ40 523 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 HS6ST3Q8IZP7 471 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 CYGBQ8WWM9 190 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 PTPRN2Q92932 1015 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 ZNF70Q9UC06 446 aaPredicted RBP19.47■□□□□ 0.71
VARS2-209ENST00000477288 SCAF8Q9UPN6 1271 aaKnown RBP19.47■□□□□ 0.71
VARS2-209ENST00000477288 APRTP07741 180 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 STILQ15468 1287 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 LRRC36Q1X8D7 754 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 NBPF9Q3BBW0 867 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 PARP9Q8IXQ6 854 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 DCP1BQ8IZD4 617 aaKnown RBP19.47■□□□□ 0.71
VARS2-209ENST00000477288 FAM162AQ96A26 154 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 MCEEQ96PE7 176 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 EPC1Q9H2F5 836 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 TRABDQ9H4I3 376 aa19.47■□□□□ 0.71
VARS2-209ENST00000477288 FAM49BQ9NUQ9 324 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms