RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 DSG1Q02413 1049 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 RABEP1Q15276 862 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 CT83Q5H943 113 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 ZNF529Q6P280 563 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.72□□□□□ -1.81
XRN1-211ENST00000477237 FRMD7Q6ZUT3 714 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 Q6ZVL8 140 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 KRT73Q86Y46 540 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 ZNF610Q8N9Z0 462 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 OR7D4Q8NG98 312 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 MED15Q96RN5 788 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 PNKPQ96T60 521 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 WNT8AQ9H1J5 351 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 VPS16Q9H269 839 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 KANSL2Q9H9L4 492 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 INTS13Q9NVM9 706 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 ZNF112Q9UJU3 913 aa3.72□□□□□ -1.81
XRN1-211ENST00000477237 VWC2LB2RUY7 222 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 TARM1B6A8C7 271 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 E9PSI1 815 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 GCOM1H8Y6P7 765 aaPredicted RBP3.71□□□□□ -1.82
XRN1-211ENST00000477237 AKR1B10O60218 316 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 KDM1AO60341 852 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 PHF2O75151 1096 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 MMP13P45452 471 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 IL2P60568 153 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 BMS1Q14692 1282 aaKnown RBP3.71□□□□□ -1.82
XRN1-211ENST00000477237 PROSER3Q2NL68 480 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 PITRM1Q5JRX3 1037 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 UBE3BQ7Z3V4 1068 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 KIF18BQ86Y91 864 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 MYCBPAPQ8TBZ2 947 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 SH3TC2Q8TF17 1288 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 STON2Q8WXE9 905 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 TMEM125Q96AQ2 219 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 PGBD1Q96JS3 809 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 MYOCQ99972 504 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 ORAI3Q9BRQ5 295 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.71□□□□□ -1.82
XRN1-211ENST00000477237 BCO1Q9HAY6 547 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 TUBA8Q9NY65 449 aaPredicted RBP3.71□□□□□ -1.82
XRN1-211ENST00000477237 SLC23A1Q9UHI7 598 aa3.71□□□□□ -1.82
XRN1-211ENST00000477237 CDK11AQ9UQ88 783 aaPredicted RBP3.71□□□□□ -1.82
XRN1-211ENST00000477237 NOC2LQ9Y3T9 749 aaKnown RBP3.71□□□□□ -1.82
XRN1-211ENST00000477237 A0A1W2PS29 197 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 GSG1L2A8MUP6 293 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 HNRNPCP07910 306 aaKnown RBP eCLIP3.7□□□□□ -1.82
XRN1-211ENST00000477237 NHLRC4P0CG21 123 aaPredicted RBP3.7□□□□□ -1.82
XRN1-211ENST00000477237 ALDH1A3P47895 512 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 PHC1P78364 1004 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 CCT2P78371 535 aaKnown RBP3.7□□□□□ -1.82
XRN1-211ENST00000477237 CDK17Q00537 523 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 SLFN5Q08AF3 891 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 PCBP1Q15365 356 aaKnown RBP eCLIP3.7□□□□□ -1.82
XRN1-211ENST00000477237 TERF2Q15554 542 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 RBMXL3Q8N7X1 1067 aaKnown RBP3.7□□□□□ -1.82
XRN1-211ENST00000477237 NUP133Q8WUM0 1156 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 MARK4Q96L34 752 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 UHRF1Q96T88 793 aaPredicted RBP3.7□□□□□ -1.82
XRN1-211ENST00000477237 DNAJC2Q99543 621 aaKnown RBP3.7□□□□□ -1.82
XRN1-211ENST00000477237 OSBPL2Q9H1P3 480 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 KCTD10Q9H3F6 313 aa3.7□□□□□ -1.82
XRN1-211ENST00000477237 WDR27A2RRH5 827 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 MYMKA6NI61 221 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 TISP43B9A030 160 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 PER3P56645 1201 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 OCRLQ01968 901 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 HYAL1Q12794 435 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 BROXQ5VW32 411 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 ATG9BQ674R7 924 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 OTUD7BQ6GQQ9 843 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 C11orf74Q86VG3 221 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 KRT78Q8N1N4 520 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 CAMKK1Q8N5S9 505 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 SMC1BQ8NDV3 1235 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 RIN2Q8WYP3 895 aaPredicted RBP3.69□□□□□ -1.82
XRN1-211ENST00000477237 PAWRQ96IZ0 340 aaKnown RBP3.69□□□□□ -1.82
XRN1-211ENST00000477237 TMEM79Q9BSE2 394 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 MOCS1Q9NZB8 636 aa3.69□□□□□ -1.82
XRN1-211ENST00000477237 LOC105371045A0A1W2PR82 267 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 KCNU1A8MYU2 1149 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 RFPL3O75679 317 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 FCER1AP12319 257 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 IL2RBP14784 551 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 DRD4P21917 467 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 LRRC41Q15345 812 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 Q6ZTC4 211 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 LRRTM3Q86VH5 581 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 FAM9AQ8IZU1 332 aaPredicted RBP3.68□□□□□ -1.82
XRN1-211ENST00000477237 EAF2Q96CJ1 260 aaPredicted RBP3.68□□□□□ -1.82
XRN1-211ENST00000477237 MRFAP1L1Q96HT8 127 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 CAMKK2Q96RR4 588 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 PRSS22Q9GZN4 317 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 VSX1Q9NZR4 365 aaPredicted RBP3.68□□□□□ -1.82
XRN1-211ENST00000477237 CD2APQ9Y5K6 639 aa3.68□□□□□ -1.82
XRN1-211ENST00000477237 PRAMEF33A0A0G2JMD5 474 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 PRAMEF10O60809 474 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 FKBP9O95302 570 aa3.67□□□□□ -1.82
XRN1-211ENST00000477237 TUBB4AP04350 444 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms