RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ZNHIT2Q9UHR6 403 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 GTPBP10A4D1E9 387 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 TMEM110-MUSTN1A8MSY1 372 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 IRS4O14654 1257 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 TYROBPO43914 113 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 TRMUO75648 421 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 XRCC5P13010 732 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 IVDP26440 423 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 MAN1A1P33908 653 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 PTK6Q13882 451 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 LPIN1Q14693 890 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 CLPPQ16740 277 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 SFT2D3Q587I9 215 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 RFX8Q6ZV50 586 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 TMEM110Q86TL2 294 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 ZFP28Q8NHY6 868 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 PLEKHO2Q8TD55 490 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 RAPGEF4Q8WZA2 1011 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 DCAF5Q96JK2 942 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 CYTH2Q99418 400 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 SYT11Q9BT88 431 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 SSU72Q9NP77 194 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.072e-7■■□□□ 13.5
HDAC1-206ENST00000476391 TDRKHQ9Y2W6 561 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 SUGT1Q9Y2Z0 365 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 C15orf38-AP3S2A0A0A6YYH1 394 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 A0A0G2JND7 137 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 SMIM22K7EJ46 135 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 TGDSO95455 350 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 FGFR1P11362 822 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 SOX5P35711 763 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 MARCKSL1P49006 195 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 MSLNQ13421 630 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 NADK2Q4G0N4 442 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 DNAL1Q4LDG9 190 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 TMEM119Q4V9L6 283 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 RNF207Q6ZRF8 634 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 ARPINQ7Z6K5 226 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 ZBTB38Q8NAP3 1195 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 SNX27Q96L92 541 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 EIF2AQ9BY44 585 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 MRPS26Q9BYN8 205 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 DNAJC18Q9H819 358 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 KIAA1586Q9HCI6 787 aa14.62□□□□□ -0.07
HDAC1-206ENST00000476391 BMP2KQ9NSY1 1161 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 UTP6Q9NYH9 597 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 AJAP1Q9UKB5 411 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 HBS1LQ9Y450 684 aaKnown RBP14.62□□□□□ -0.07
HDAC1-206ENST00000476391 TCRBV7S2A1N4TA0A589 114 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 SPDYE16A6NNV3 312 aaPredicted RBP14.61□□□□□ -0.07
HDAC1-206ENST00000476391 USP1O94782 785 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 NR2F2P24468 414 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 COG7P83436 770 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 DLG1Q12959 904 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 LVRNQ6Q4G3 990 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 KYAT3Q6YP21 454 aaKnown RBP14.61□□□□□ -0.07
HDAC1-206ENST00000476391 ULK2Q8IYT8 1036 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 ITPKCQ96DU7 683 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 FAM89AQ96GI7 184 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 POP1Q99575 1024 aaKnown RBP14.61□□□□□ -0.07
HDAC1-206ENST00000476391 BRIP1Q9BX63 1249 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 S100A14Q9HCY8 104 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 ANAPC5Q9UJX4 755 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 PCDHA2Q9Y5H9 948 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 BAZ2AQ9UIF9 1905 aaKnown RBP14.61□□□□□ -0.07
HDAC1-206ENST00000476391 EXOC1LA0A1B0GW35 172 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 B2RBV5 119 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 TOM1O60784 492 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 SLC5A1P13866 664 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 KRT15P19012 456 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 RELAQ04206 551 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 MAPK6Q16659 721 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 C1orf146Q5VVC0 180 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 KRT79Q5XKE5 535 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 PACS1Q6VY07 963 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 BBOF1Q8ND07 529 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 SCFD1Q8WVM8 642 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 PRPF31Q8WWY3 499 aaKnown RBP14.61□□□□□ -0.07
HDAC1-206ENST00000476391 MTBPQ96DY7 904 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 CFAP57Q96MR6 1250 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 MTMR9Q96QG7 549 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 ARHGEF4Q9NR80 690 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 DNAJC17Q9NVM6 304 aaKnown RBP14.61□□□□□ -0.07
HDAC1-206ENST00000476391 KIAA1522Q9P206 1035 aaPredicted RBP14.61□□□□□ -0.07
HDAC1-206ENST00000476391 CROTQ9UKG9 612 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 STX8Q9UNK0 236 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 FAF1Q9UNN5 650 aaPredicted RBP14.61□□□□□ -0.07
HDAC1-206ENST00000476391 PLA2G4CQ9UP65 541 aa14.61□□□□□ -0.07
HDAC1-206ENST00000476391 COL1A1P02452 1464 aaPredicted RBP14.6□□□□□ -0.07
HDAC1-206ENST00000476391 CCDC162PA2VCL2 907 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 ADCY3O60266 1144 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 LTKP29376 864 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 HDAC4P56524 1084 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 IRX4P78413 519 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 SYCP2LQ5T4T6 812 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 THOC7Q6I9Y2 204 aaKnown RBP14.6□□□□□ -0.07
HDAC1-206ENST00000476391 MARVELD2Q8N4S9 558 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 GRK7Q8WTQ7 553 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 GREM2Q9H772 168 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 PPCSQ9HAB8 311 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms