RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 ABRAQ8N0Z2 381 aa9.52□□□□□ -0.88
CCDC66-216ENST00000476142 PPP1R16BQ96T49 567 aa9.52□□□□□ -0.88
CCDC66-216ENST00000476142 GPR20Q99678 358 aa9.52□□□□□ -0.88
CCDC66-216ENST00000476142 HEMGNQ9BXL5 484 aa9.52□□□□□ -0.88
CCDC66-216ENST00000476142 LRRC4CQ9HCJ2 640 aa9.52□□□□□ -0.88
CCDC66-216ENST00000476142 NOVA2Q9UNW9 492 aaKnown RBP9.52□□□□□ -0.88
CCDC66-216ENST00000476142 RRP15Q9Y3B9 282 aaKnown RBP9.52□□□□□ -0.88
CCDC66-216ENST00000476142 MYH9P35579 1960 aaKnown RBP9.52□□□□□ -0.88
CCDC66-216ENST00000476142 ADGRA2Q96PE1 1338 aa9.52□□□□□ -0.88
CCDC66-216ENST00000476142 LCTP09848 1927 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 INO80B-WBP1J3KQ70 363 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 PODXLO00592 558 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 PPFIA2O75334 1257 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 ECEL1O95672 775 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 CST3P01034 146 aaPredicted RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 CYP1A1P04798 512 aaPredicted RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 EFNA5P52803 228 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 MYL6P60660 151 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 CENPCQ03188 943 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 TRPC3Q13507 836 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 IER5Q5VY09 327 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 DENND2CQ68D51 928 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 ZDHHC24Q6UX98 284 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 MON1BQ7L1V2 547 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 BRSK2Q8IWQ3 736 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 ANKRD13AQ8IZ07 590 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 CCDC114Q96M63 670 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 FAM118BQ9BPY3 351 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 FAM107BQ9H098 131 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 AVENQ9NQS1 362 aaPredicted RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 GRHL1Q9NZI5 618 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 MTRF1LQ9UGC7 380 aaKnown RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 PCYOX1Q9UHG3 505 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 PASKQ96RG2 1323 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 WDR81Q562E7 1941 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 TLDC2A0PJX2 215 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 O00370 1275 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 NDUFAB1O14561 156 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 MSCO60682 206 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 TOM1L1O75674 476 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 SLC25A27O95847 323 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 SHBGP04278 402 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 NOMO3P69849 1222 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 SIX1Q15475 284 aaPredicted RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 TRIP13Q15645 432 aaPredicted RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 CELF3Q5SZQ8 465 aaKnown RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 ZPBP2Q6X784 338 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 TCP11Q8WWU5 503 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 OPTNQ96CV9 577 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 CDCA5Q96FF9 252 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 ACO2Q99798 780 aaKnown RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 KLHL11Q9NVR0 708 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 RBPJLQ9UBG7 517 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 ASIC3Q9UHC3 531 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 AGTPBP1Q9UPW5 1226 aa9.52□□□□□ -0.89
CCDC66-216ENST00000476142 POLR2AP24928 1970 aaKnown RBP9.52□□□□□ -0.89
CCDC66-216ENST00000476142 WDR90Q96KV7 1748 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 DCDC2CA8MYV0 355 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 WEE2P0C1S8 567 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 TXNP10599 105 aaKnown RBP9.51□□□□□ -0.89
CCDC66-216ENST00000476142 FGFR4P22455 802 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 BRD2P25440 801 aaKnown RBP9.51□□□□□ -0.89
CCDC66-216ENST00000476142 LSP1P33241 339 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 CLCN3P51790 818 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 MAGOHP61326 146 aaKnown RBP9.51□□□□□ -0.89
CCDC66-216ENST00000476142 MXD4Q14582 209 aaPredicted RBP9.51□□□□□ -0.89
CCDC66-216ENST00000476142 PLCB4Q15147 1175 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 ZNF568Q3ZCX4 644 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 TRIM72Q6ZMU5 477 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 PDGFCQ9NRA1 345 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 CHST7Q9NS84 486 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 TLR3O15455 904 aaKnown RBP9.51□□□□□ -0.89
CCDC66-216ENST00000476142 B4GALT5O43286 388 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 PROSCO94903 275 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 KRT19P08727 400 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 TMEM191BP0C7N4 346 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 MDH1P40925 334 aaKnown RBP9.51□□□□□ -0.89
CCDC66-216ENST00000476142 SLC1A1P43005 524 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 VPS41P49754 854 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 KRT17Q04695 432 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 CALCOCO2Q13137 446 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 MAMLD1Q13495 774 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 SRLQ86TD4 932 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 WDR49Q8IV35 697 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 FGD4Q96M96 766 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 MRPL47Q9HD33 250 aaKnown RBP9.51□□□□□ -0.89
CCDC66-216ENST00000476142 PARP2Q9UGN5 583 aa9.51□□□□□ -0.89
CCDC66-216ENST00000476142 SPDYE5A6NIY4 337 aa9.5□□□□□ -0.89
CCDC66-216ENST00000476142 ZBTB42B2RXF5 422 aa9.5□□□□□ -0.89
CCDC66-216ENST00000476142 CXCL11O14625 94 aa9.5□□□□□ -0.89
CCDC66-216ENST00000476142 OGTO15294 1046 aa9.5□□□□□ -0.89
CCDC66-216ENST00000476142 CSDE1O75534 798 aaKnown RBP9.5□□□□□ -0.89
CCDC66-216ENST00000476142 RALAP11233 206 aa9.5□□□□□ -0.89
CCDC66-216ENST00000476142 OSBPP22059 807 aa9.5□□□□□ -0.89
CCDC66-216ENST00000476142 TMOD1P28289 359 aa9.5□□□□□ -0.89
CCDC66-216ENST00000476142 FNTAP49354 379 aa9.5□□□□□ -0.89
CCDC66-216ENST00000476142 CYP1B1Q16678 543 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms