RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 VRTNQ9H8Y1 702 aa12.53□□□□□ -0.4
BEST3-204ENST00000476098 UBE2TQ9NPD8 197 aaPredicted RBP12.53□□□□□ -0.4
BEST3-204ENST00000476098 NLRC4Q9NPP4 1024 aa12.53□□□□□ -0.4
BEST3-204ENST00000476098 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
BEST3-204ENST00000476098 DNAJC12Q9UKB3 198 aa12.53□□□□□ -0.4
BEST3-204ENST00000476098 LUC7L2Q9Y383 392 aaKnown RBP12.53□□□□□ -0.4
BEST3-204ENST00000476098 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
BEST3-204ENST00000476098 AKR1B15C9JRZ8 316 aaPredicted RBP12.52□□□□□ -0.4
BEST3-204ENST00000476098 HOXA2O43364 376 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 MFAP3LO75121 409 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 FGBP02675 491 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 ATICP31939 592 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 WDR5P61964 334 aaKnown RBP12.52□□□□□ -0.4
BEST3-204ENST00000476098 NOP14P78316 857 aaKnown RBP12.52□□□□□ -0.4
BEST3-204ENST00000476098 ZBED6P86452 979 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 GRIK3Q13003 919 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 TMEM240Q5SV17 173 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 TC2NQ8N9U0 490 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 TAF4BQ92750 862 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 KAT5Q92993 513 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 HPDLQ96IR7 371 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 KREMEN1Q96MU8 473 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 IMPG2Q9BZV3 1241 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 KANSL3Q9P2N6 904 aa12.52□□□□□ -0.4
BEST3-204ENST00000476098 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.4
BEST3-204ENST00000476098 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 UPP2O95045 317 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 AMHP03971 560 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 TPM1P09493 284 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 RFX1P22670 979 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 KRT9P35527 623 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 DEKP35659 375 aaKnown RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 JAM2P57087 298 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 GSDMDP57764 484 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 DEFB103AP81534 67 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 GCNT1Q02742 428 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 ZNF699Q32M78 642 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 CACNA2D4Q7Z3S7 1137 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 ZNF280BQ86YH2 543 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 PPM1KQ8N3J5 372 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 LRRC52Q8N7C0 313 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 CCDC150Q8NCX0 1101 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 URGCPQ8TCY9 931 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 PAAF1Q9BRP4 392 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 STK33Q9BYT3 514 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 GPR88Q9GZN0 384 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 TBC1D13Q9NVG8 400 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 CACNG4Q9UBN1 327 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 DAAM1Q9Y4D1 1078 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 LAMA2P24043 3122 aaKnown RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 CASTOR2A6NHX0 329 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 B4GALT3O60512 393 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 DGKIO75912 1065 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 DDHD2O94830 711 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 CLCNKBP51801 687 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 DSC1Q08554 894 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 TUSC3Q13454 348 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 UPP1Q16831 310 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 WDR72Q3MJ13 1102 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 PDXDC1Q6P996 788 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 TMCO2Q7Z6W1 182 aaPredicted RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 CNGA4Q8IV77 575 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 OR8K1Q8NGG5 319 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 ARID3AQ99856 593 aa12.51□□□□□ -0.41
BEST3-204ENST00000476098 LBHD1Q9BQE6 289 aaPredicted RBP12.51□□□□□ -0.41
BEST3-204ENST00000476098 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.41
BEST3-204ENST00000476098 TTC3P53804 2025 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 LRRC53A6NM62 1247 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 PODXLO00592 558 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 SPTLC1O15269 473 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 PTMAP06454 111 aaKnown RBP12.5□□□□□ -0.41
BEST3-204ENST00000476098 ASPAP45381 313 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 MFAP3P55082 362 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 LILRA4P59901 499 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 MYO1EQ12965 1108 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 CUL2Q13617 745 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 DRAP1Q14919 205 aaPredicted RBP12.5□□□□□ -0.41
BEST3-204ENST00000476098 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 ZNF667Q5HYK9 610 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 PSRC1Q6PGN9 363 aaPredicted RBP12.5□□□□□ -0.41
BEST3-204ENST00000476098 ENOSF1Q7L5Y1 443 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 RABGGTAQ92696 567 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 FAXDC2Q96IV6 333 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 FAM81BQ96LP2 452 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 NIF3L1Q9GZT8 377 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 ABHD10Q9NUJ1 306 aa12.5□□□□□ -0.41
BEST3-204ENST00000476098 CXXC1Q9P0U4 656 aaPredicted RBP12.5□□□□□ -0.41
BEST3-204ENST00000476098 NXF1Q9UBU9 619 aaKnown RBP12.5□□□□□ -0.41
BEST3-204ENST00000476098 MYO6Q9UM54 1294 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms