RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 COMTP21964 271 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 GRIA2P42262 883 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 RAP1GDS1P52306 607 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 ITGA8P53708 1063 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 GEMIN4P57678 1058 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 TFAP4Q01664 338 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 CAV1Q03135 178 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 C6orf183Q5T699 404 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 KLC3Q6P597 504 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 RNF207Q6ZRF8 634 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 RELL1Q8IUW5 271 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 REXO1Q8N1G1 1221 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SLC43A3Q8NBI5 491 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 NMD3Q96D46 503 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 GPR88Q9GZN0 384 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 WNT8AQ9H1J5 351 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 NPHS2Q9NP85 383 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 TYW1Q9NV66 732 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 PTTG2Q9NZH5 202 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 DNAJB4Q9UDY4 337 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SMG5Q9UPR3 1016 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 TSC22D4Q9Y3Q8 395 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 ANPEPP15144 967 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 AMPD1P23109 780 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 CASP5P51878 434 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 CDC16Q13042 620 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 GRM2Q14416 872 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 FYB2Q5VWT5 728 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 ZNF75CPQ92670 426 aaPredicted RBP11.17□□□□□ -0.62
ABCF1-205ENST00000475993 MXD3Q9BW11 206 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 TMEM260Q9NX78 707 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 HESX1Q9UBX0 185 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 ASIC3Q9UHC3 531 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 PRELID1Q9Y255 219 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 FRMPD4Q14CM0 1322 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 CFAP69A5D8W1 941 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 SORBS3O60504 671 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 DNAJC6O75061 913 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 GCAP28676 217 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 RPA3P35244 121 aaPredicted RBP11.17□□□□□ -0.62
ABCF1-205ENST00000475993 CACNB1Q02641 598 aaPredicted RBP11.17□□□□□ -0.62
ABCF1-205ENST00000475993 ITGA9Q13797 1035 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 PTK6Q13882 451 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 DRAP1Q14919 205 aaPredicted RBP11.17□□□□□ -0.62
ABCF1-205ENST00000475993 KNOP1Q1ED39 458 aaKnown RBP11.17□□□□□ -0.62
ABCF1-205ENST00000475993 PRUNE1Q86TP1 453 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 MORC4Q8TE76 937 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 CEP295NLQ96MC4 621 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
ABCF1-205ENST00000475993 NDUFA13Q9P0J0 144 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 DCCP43146 1447 aa11.17□□□□□ -0.62
ABCF1-205ENST00000475993 RGL2O15211 777 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 SLC16A3O15427 465 aaKnown RBP11.16□□□□□ -0.62
ABCF1-205ENST00000475993 ABHD2P08910 425 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 RARBP10826 455 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 TNFAIP3P21580 790 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 HOXD13P35453 343 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 RGS2P41220 211 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 KRT72Q14CN4 511 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 SLC1A5Q15758 541 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-205ENST00000475993 CAPN12Q6ZSI9 719 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 SYDE1Q6ZW31 735 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-205ENST00000475993 LRRC43Q8N309 656 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.16□□□□□ -0.62
ABCF1-205ENST00000475993 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■□□□ 12.8
ABCF1-205ENST00000475993 BHMTQ93088 406 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 PWWP2AQ96N64 755 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 TTC25Q96NG3 672 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 TRABDQ9H4I3 376 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 ZDHHC7Q9NXF8 308 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 ANKFY1Q9P2R3 1169 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 SPATA31A1Q5TZJ5 1347 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 ESYT2A0FGR8 921 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 UNCXA6NJT0 531 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 KLRF2D3W0D1 207 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 E9PMD0 336 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 PDXKO00764 312 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 MAGEC1O60732 1142 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 PLA2G4BP0C869 781 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 PORP16435 677 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-205ENST00000475993 CCDC174Q6PII3 467 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 GPBP1Q86WP2 473 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 TDRPQ86YL5 185 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
ABCF1-205ENST00000475993 RFWD2Q8NHY2 731 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 DQX1Q8TE96 717 aaKnown RBP11.16□□□□□ -0.62
ABCF1-205ENST00000475993 KIAA1586Q9HCI6 787 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 DNAJC12Q9UKB3 198 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 ZNF148Q9UQR1 794 aa11.16□□□□□ -0.62
ABCF1-205ENST00000475993 TMEM110-MUSTN1A8MSY1 372 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 FSCN2O14926 492 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 TYROBPO43914 113 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 TOM1O60784 492 aa11.15□□□□□ -0.62
ABCF1-205ENST00000475993 GOLGA8HP0CJ92 632 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms