RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 HSD3B7Q9H2F3 369 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 ZNF576Q9H609 170 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 CERS4Q9HA82 394 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 CHD7Q9P2D1 2997 aa23.94■■□□□ 1.42
MCF2L2-209ENST00000475664 SMTNL1A8MU46 457 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 STX10O60499 249 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 FGF18O76093 207 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 B3GAT3O94766 335 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 POLR2BP30876 1174 aaKnown RBP23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 GCLMP48507 274 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 SV2AQ7L0J3 742 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 FBXO22Q8NEZ5 403 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 TMEM8AQ9HCN3 771 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 MAGEC2Q9UBF1 373 aaPredicted RBP23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 ADAM28Q9UKQ2 775 aa23.93■■□□□ 1.42
MCF2L2-209ENST00000475664 KCNJ18B7U540 433 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 EFEMP2O95967 443 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 ZNF18P17022 549 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 PLCB3Q01970 1234 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 KCNJ12Q14500 433 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 FAM200AQ8TCP9 573 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 HASPINQ8TF76 798 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 ARNTL2Q8WYA1 636 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 TMEM169Q96HH4 297 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 C11orf84Q9BUA3 381 aaPredicted RBP23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 TTYH1Q9H313 450 aaPredicted RBP23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 AGAP1Q9UPQ3 857 aa23.92■■□□□ 1.42
MCF2L2-209ENST00000475664 EPOPA6NHQ4 379 aa23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 EEF1GP26641 437 aaKnown RBP23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 MTIF2P46199 727 aaKnown RBP23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 MXI1P50539 228 aa23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 RBP5P82980 135 aa23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 BIRC3Q13489 604 aa23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 TCP11X2Q5H9J9 407 aa23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 LRRC52Q8N7C0 313 aa23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 VN1R3Q9BXE9 311 aa23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 MMRN2Q9H8L6 949 aa23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.91■■□□□ 1.42
MCF2L2-209ENST00000475664 BECN2A8MW95 431 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 H3BNC9 293 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 TADA2AO75478 443 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 VNN1O95497 513 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 CST3P01034 146 aaPredicted RBP23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 KRT19P08727 400 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 AARSP49588 968 aaKnown RBP eCLIP23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 CBWD6Q4V339 395 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 CBWD3Q5JTY5 395 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 CBWD5Q5RIA9 395 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 KRT39Q6A163 491 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 FUT10Q6P4F1 479 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 LUZP1Q86V48 1076 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 CREBRFQ8IUR6 639 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 RNF168Q8IYW5 571 aaPredicted RBP23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 ZNF560Q96MR9 790 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 VWA8A3KMH1 1905 aa23.9■■□□□ 1.42
MCF2L2-209ENST00000475664 SF3B1O75533 1304 aaKnown RBP eCLIP23.89■■□□□ 1.424e-7■■■■■ 133.7
MCF2L2-209ENST00000475664 ATG2AQ2TAZ0 1938 aa23.89■■□□□ 1.42
MCF2L2-209ENST00000475664 SPTLC1O15269 473 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 PHACTR2O75167 634 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 PNPLA4P41247 253 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 BRCC3P46736 316 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 FMO5P49326 533 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 TAF6P49848 677 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 LILRA4P59901 499 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 KCNH2Q12809 1159 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 GPM6BQ13491 265 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 NCOA4Q13772 614 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 MAN2A1Q16706 1144 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 ZNF697Q5TEC3 545 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 GPR153Q6NV75 609 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 DDX53Q86TM3 631 aaKnown RBP23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 SPPL3Q8TCT6 385 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 TUBGCP2Q9BSJ2 902 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 GPR62Q9BZJ7 368 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 ALG13Q9NP73 1137 aaKnown RBP23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 LZTS1Q9Y250 596 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 NUB1Q9Y5A7 615 aa23.89■■□□□ 1.41
MCF2L2-209ENST00000475664 GRM6O15303 877 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 PMM2O15305 246 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 HLA-DRAP01903 254 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 AFPP02771 609 aaKnown RBP23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 PAX3P23760 479 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 KRT17Q04695 432 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 UBE3AQ05086 875 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 TRPC3Q13507 836 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 TIGD5Q53EQ6 642 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 TAS1R2Q8TE23 839 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 SUSD3Q96L08 255 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 XYLT2Q9H1B5 865 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 COQ4Q9Y3A0 265 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 TSC2P49815 1807 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 MYO9BQ13459 2157 aa23.88■■□□□ 1.41
MCF2L2-209ENST00000475664 I3L4J1 428 aa23.87■■□□□ 1.41
MCF2L2-209ENST00000475664 N4BP1O75113 896 aaKnown RBP23.87■■□□□ 1.41
MCF2L2-209ENST00000475664 STAU1O95793 577 aaKnown RBP23.87■■□□□ 1.41
MCF2L2-209ENST00000475664 PIK3CAP42336 1068 aa23.87■■□□□ 1.41
MCF2L2-209ENST00000475664 MYL6P60660 151 aa23.87■■□□□ 1.41
MCF2L2-209ENST00000475664 MYL7Q01449 175 aa23.87■■□□□ 1.41
MCF2L2-209ENST00000475664 ELAVL2Q12926 359 aaKnown RBP23.87■■□□□ 1.41
MCF2L2-209ENST00000475664 KRT31Q15323 416 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms