RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 DGAT1O75907 488 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 CYP19A1P11511 503 aaPredicted RBP18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 KCNA3P22001 575 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 VEPH1Q14D04 833 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 KYNUQ16719 465 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 SH3TC2Q8TF17 1288 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 PIN4Q9Y237 131 aaKnown RBP18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 TMEM120BA0PK00 339 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 TRIM66O15016 1216 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 HIST1H2AGP0C0S8 130 aaPredicted RBP18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 HIST1H2ADP20671 130 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 TRIP10Q15642 601 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 SNRNP35Q16560 246 aaKnown RBP18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 TC2NQ8N9U0 490 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 HIST1H2AHQ96KK5 128 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 HIST1H2AJQ99878 128 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 H2AFJQ9BTM1 129 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 TIPINQ9BVW5 301 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 POLRMTO00411 1230 aaKnown RBP18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 SOX11P35716 441 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 CARSP49589 748 aaKnown RBP18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 TSPAN17Q96FV3 270 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 ZFYVE19Q96K21 471 aa18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 C20orf96Q9NUD7 363 aaPredicted RBP18.61■□□□□ 0.57
LPCAT1-202ENST00000475622 MYMKA6NI61 221 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 SPDYE5A6NIY4 337 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 WDR47O94967 919 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 CDH2P19022 906 aaPredicted RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 VCAM1P19320 739 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 PIGHQ14442 188 aaPredicted RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 SPDYE7PQ495Y7 208 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 KIF2BQ8N4N8 673 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 CYGBQ8WWM9 190 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 HERC5Q9UII4 1024 aaKnown RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 B2RBV5 119 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 WEE2P0C1S8 567 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 COPB2P35606 906 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 RBP5P82980 135 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 OSBPL8Q9BZF1 889 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 PIDD1Q9HB75 910 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 FAM32AQ9Y421 112 aaKnown RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 E2F8A0AVK6 867 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 ADCY3O60266 1144 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 LRRC74AQ0VAA2 488 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 XKR3Q5GH77 459 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 GALNT4Q8N4A0 578 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 PRDM5Q9NQX1 630 aaPredicted RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 CCDC159P0C7I6 412 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 MYBP10242 640 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 SLC9A1P19634 815 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 STILQ15468 1287 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 C16orf89Q6UX73 402 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 SPATA2LQ8IUW3 424 aaPredicted RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 DYRK4Q9NR20 520 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 PLEKHG2Q9H7P9 1386 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 C5orf58C9J3I9 102 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 TXNP10599 105 aaKnown RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 MYL2P10916 166 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 DDX5P17844 614 aaKnown RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 TCN1P20061 433 aaPredicted RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 MAGEA4P43358 317 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 C3orf62Q6ZUJ4 267 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 CDR2LQ86X02 465 aaPredicted RBP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 DDX42Q86XP3 938 aaKnown RBP eCLIP18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 PLD3Q8IV08 490 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 ATPAF2Q8N5M1 289 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 APPL2Q8NEU8 664 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 SH3GL3Q99963 347 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 CCDC134Q9H6E4 229 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 ATP11BQ9Y2G3 1177 aa18.6■□□□□ 0.57
LPCAT1-202ENST00000475622 MYO1GB0I1T2 1018 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 PSMD3O43242 534 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 SRP72O76094 671 aaKnown RBP18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 KLHL2O95198 593 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 COMTP21964 271 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 MTM1Q13496 603 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 ZIM3Q96PE6 472 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 APOBEC3FQ8IUX4 373 aaKnown RBP18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 GFM2Q969S9 779 aaKnown RBP18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 ABHD8Q96I13 439 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 HMGCS2P54868 508 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 TMEM154Q6P9G4 183 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 PCYOX1LQ8NBM8 494 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 ARHGEF1Q92888 912 aaKnown RBP18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 PABPC5Q96DU9 382 aaKnown RBP18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 CELF4Q9BZC1 486 aaKnown RBP18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 NDUFS3O75489 264 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 SEC24CP53992 1094 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 ZNF543Q08ER8 600 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 SGSM1Q2NKQ1 1148 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 NSUN4Q96CB9 384 aaKnown RBP18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 PPCSQ9HAB8 311 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 LATS2Q9NRM7 1088 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 MTMR4Q9NYA4 1195 aa18.59■□□□□ 0.57
LPCAT1-202ENST00000475622 ASB14A6NK59 587 aa18.58■□□□□ 0.57
LPCAT1-202ENST00000475622 GRAP2O75791 330 aa18.58■□□□□ 0.57
LPCAT1-202ENST00000475622 KRT8P05787 483 aa18.58■□□□□ 0.57
LPCAT1-202ENST00000475622 TRIM60Q495X7 471 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms