RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 EPHB4P54760 987 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 CENPCQ03188 943 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 ZNF211Q13398 564 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 CLUL1Q15846 466 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 NIF3L1Q9GZT8 377 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 WNT8AQ9H1J5 351 aa16.42■□□□□ 0.22
RPUSD3-215ENST00000475470 SART1O43290 800 aaKnown RBP16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 MCF2P10911 925 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 HOXD8P13378 290 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 ITGA4P13612 1032 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 AMHR2Q16671 573 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 ZNF699Q32M78 642 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 SND1Q7KZF4 910 aaKnown RBP eCLIP16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 PASD1Q8IV76 773 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 TMEM192Q8IY95 271 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 IFT81Q8WYA0 676 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 KRT35Q92764 455 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 ZBTB9Q96C00 473 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 DDX47Q9H0S4 455 aaKnown RBP16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 ESYT3A0FGR9 886 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 ZSCAN5CA6NGD5 496 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 STAG3L1P0CL83 205 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 CD58P19256 250 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 GABPB1Q06547 395 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 EMBQ6PCB8 327 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 CPB2Q96IY4 423 aa16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 AVENQ9NQS1 362 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-215ENST00000475470 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 ADCY6O43306 1168 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 CFHP08603 1231 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 KRT19P08727 400 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 RRM1P23921 792 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 SSTR3P32745 418 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 CARSP49589 748 aaKnown RBP16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 MAP2K5Q13163 448 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 PRAMEF19Q5SWL8 479 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 MARCH8Q5T0T0 291 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 CCDC102AQ96A19 550 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 PDZD7Q9H5P4 517 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 SLITRK6Q9H5Y7 841 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 ANAPC7Q9UJX3 599 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 HPCAL4Q9UM19 191 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 ZSWIM8A7E2V4 1837 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 GOLGA6L10A0A0M3HER8 536 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 H3BQF6 201 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 IGF2BP3O00425 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 ERLIN2O94905 339 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 ARF4P18085 180 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 PAK2Q13177 524 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 HSP90B2PQ58FF3 399 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 MORN1Q5T089 497 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 PHLDB2Q86SQ0 1253 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 UBR7Q8N806 425 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 CCDC26Q8TAB7 109 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 NMRK2Q9NPI5 230 aa16.4■□□□□ 0.22
RPUSD3-215ENST00000475470 CCDC66A2RUB6 948 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 MANSC4A6NHS7 340 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 LACTBL1A8MY62 500 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 ITGBL1O95965 494 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 MARCKSL1P49006 195 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 PEX5P50542 639 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF132P52740 706 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 NOMO3P69849 1222 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 PPP1R2P3Q6NXS1 205 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 MAATS1Q7Z4T9 603 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 ADAT2Q7Z6V5 191 aaKnown RBP16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 RASAL3Q86YV0 1011 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 CASKIN2Q8WXE0 1202 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 CD101Q93033 1021 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 C11orf70Q9BRQ4 267 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 SETD4Q9NVD3 440 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 ADAM22Q9P0K1 906 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 NFU1Q9UMS0 254 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 KAT6AQ92794 2004 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 RRN3P2A6NIE6 340 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 NFICP08651 508 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 CTNNA1P35221 906 aaKnown RBP16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 KYAT1Q16773 422 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF394Q53GI3 561 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 C2CD6Q53TS8 623 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 SEL1L2Q5TEA6 688 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 SCARA5Q6ZMJ2 495 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 MON1BQ7L1V2 547 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 KIAA0319LQ8IZA0 1049 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 XYLT2Q9H1B5 865 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 AMACRQ9UHK6 382 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 PCDHA3Q9Y5H8 950 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 ZNF236Q9UL36 1845 aa16.39■□□□□ 0.21
RPUSD3-215ENST00000475470 WEE2P0C1S8 567 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 CTNNA2P26232 953 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 PPP2R5EQ16537 467 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 AADACL2Q6P093 401 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 CPNE8Q86YQ8 564 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 CAVIN3Q969G5 261 aa16.38■□□□□ 0.21
RPUSD3-215ENST00000475470 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms