RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 ZNF568Q3ZCX4 644 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 FAM153CQ494X1 144 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 DUSP28Q4G0W2 176 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 SEL1L2Q5TEA6 688 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 NAA35Q5VZE5 725 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 SCARA3Q6AZY7 606 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 PLEKHA7Q6IQ23 1121 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 TMEM270Q6UE05 265 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 ZBTB33Q86T24 672 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 IQCKQ8N0W5 287 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 PRELID2Q8N945 189 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 C1orf131Q8NDD1 294 aaKnown RBP10.48□□□□□ -0.73
USP39-214ENST00000474572 CCDC102AQ96A19 550 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 CYFIP2Q96F07 1278 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 NLRP4Q96MN2 994 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 PARK7Q99497 189 aaKnown RBP10.48□□□□□ -0.73
USP39-214ENST00000474572 MTMR12Q9C0I1 747 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 NIF3L1Q9GZT8 377 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 RAB17Q9H0T7 212 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 XYLT2Q9H1B5 865 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 MINDY3Q9H8M7 445 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 FAM114A2Q9NRY5 505 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 PCYOX1Q9UHG3 505 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 FAM153AQ9UHL3 310 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 ADAM21Q9UKJ8 722 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 PCDHGC3Q9UN70 934 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 IVNS1ABPQ9Y6Y0 642 aa10.48□□□□□ -0.73
USP39-214ENST00000474572 GOLGA6L10A0A0M3HER8 536 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.47□□□□□ -0.73
USP39-214ENST00000474572 TCRBV5S1A1TA0A578 114 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 ESYT3A0FGR9 886 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 GOLGA6BA6NDN3 693 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 SLC15A5A6NIM6 579 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 GOLGA8KD6RF30 607 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 INO80B-WBP1J3KQ70 363 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 GPR25O00155 361 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 MEFVO15553 781 aaPredicted RBP10.47□□□□□ -0.73
USP39-214ENST00000474572 TTI1O43156 1089 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 B4GALT5O43286 388 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 RNF40O75150 1001 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 PPFIA4O75335 1185 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 LSM8O95777 96 aaKnown RBP10.47□□□□□ -0.73
USP39-214ENST00000474572 GJB1P08034 283 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 MMP3P08254 477 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 IQCF3P0C7M6 154 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 PYGMP11217 842 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 MAPK4P31152 587 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 CHRNA3P32297 505 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 GGCXP38435 758 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 PTGIRP43119 386 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 NSFP46459 744 aaKnown RBP10.47□□□□□ -0.73
USP39-214ENST00000474572 RWDD2BP57060 319 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 MYL6P60660 151 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 KYAT1Q16773 422 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 SPDYCQ5MJ68 293 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 GJC2Q5T442 439 aaPredicted RBP10.47□□□□□ -0.73
USP39-214ENST00000474572 DUPD1Q68J44 220 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 MTHFD1LQ6UB35 978 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 PLEKHH3Q7Z736 793 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 CPNE8Q86YQ8 564 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 SLC13A5Q86YT5 568 aaPredicted RBP10.47□□□□□ -0.73
USP39-214ENST00000474572 ZDHHC14Q8IZN3 488 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 CEP120Q8N960 986 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 CXorf38Q8TB03 319 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 AFG1LQ8WV93 481 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 ZNF606Q8WXB4 792 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 PIK3R5Q8WYR1 880 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 SLCO2A1Q92959 643 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 ANKRD36BP1Q96IX9 119 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 BTBD6Q96KE9 485 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 GDAP1L1Q96MZ0 367 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 RUNDC3BQ96NL0 473 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 HINFPQ9BQA5 517 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 TCHPQ9BT92 498 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 BCO2Q9BYV7 579 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 INO80BQ9C086 356 aaPredicted RBP10.47□□□□□ -0.73
USP39-214ENST00000474572 ZNF518BQ9C0D4 1074 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 NEUROG2Q9H2A3 272 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 ABHD16BQ9H3Z7 469 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 PDZD7Q9H5P4 517 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 ASB7Q9H672 318 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 VPS18Q9P253 973 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 AMACRQ9UHK6 382 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 ANAPC7Q9UJX3 599 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 CLEC11AQ9Y240 323 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 SCINQ9Y6U3 715 aa10.47□□□□□ -0.73
USP39-214ENST00000474572 A0A087WZ62 844 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 TMEM110-MUSTN1A8MSY1 372 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 FSCN2O14926 492 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 SPOPO43791 374 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 OPA1O60313 960 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 ZEB2O60315 1214 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 HSF2BPO75031 334 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 PROSCO94903 275 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 STAU1O95793 577 aaKnown RBP10.46□□□□□ -0.73
USP39-214ENST00000474572 TNNC2P02585 160 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 CFHP08603 1231 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 TMEM191BP0C7N4 346 aa10.46□□□□□ -0.73
USP39-214ENST00000474572 SMPD1P17405 629 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms