RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ANKEF1Q9NU02 776 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 PRMT7Q9NVM4 692 aaPredicted RBP5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 SNTG2Q9NY99 539 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 CDY1Q9Y6F8 540 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 KALRNO60229 2985 aa5.67□□□□□ -1.5
SNRNP40-204ENST00000474025 SETXQ7Z333 2677 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 SDK1Q7Z5N4 2213 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 LRRIQ4A6NIV6 560 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 I3L4J1 428 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 ARNTLO00327 626 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 MAN2B1O00754 1011 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 CPLX1O14810 134 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 N4BP3O15049 544 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 MARCH6O60337 910 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 GDF9O60383 454 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 USO1O60763 962 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 EDN1P05305 212 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 PSMA5P28066 241 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 TKTP29401 623 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 CCR2P41597 374 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 RBM25P49756 843 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 CCR3P51677 355 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 CLCNKBP51801 687 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 SHC2P98077 582 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 SATB1Q01826 763 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 ROR1Q01973 937 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 GRM2Q14416 872 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 CSRP2Q16527 193 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 EARS2Q5JPH6 523 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 FAM78AQ5JUQ0 283 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 SLC8B1Q6J4K2 584 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 PADI6Q6TGC4 694 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 CD300LGQ6UXG3 332 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 VITQ6UXI7 678 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 PRR23BQ6ZRT6 265 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 PIK3AP1Q6ZUJ8 805 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 ANKS3Q6ZW76 656 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 RUFY3Q7L099 469 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 MAP4K3Q8IVH8 894 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 NOSTRINQ8IVI9 506 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 SLFN12Q8IYM2 578 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 PIGOQ8TEQ8 1089 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 ZNF274Q96GC6 653 aaPredicted RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 CCDC43Q96MW1 224 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 PPP1R10Q96QC0 940 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 NAP1L4Q99733 375 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 TRMT61BQ9BVS5 477 aaKnown RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 CCDC113Q9H0I3 377 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 FZD8Q9H461 694 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 ZNF334Q9HCZ1 680 aaPredicted RBP5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 TRPV5Q9NQA5 729 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 SEMA4GQ9NTN9 838 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 GJB4Q9NTQ9 266 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 USP20Q9Y2K6 914 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 BACE2Q9Y5Z0 518 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 PIAS3Q9Y6X2 628 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 NCANO14594 1321 aa5.66□□□□□ -1.5
SNRNP40-204ENST00000474025 GCN1Q92616 2671 aaKnown RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 A0A087WWV3 80 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 WDR27A2RRH5 827 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 TMEM8BA6NDV4 472 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 K7ESF4 209 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 ACKR2O00590 384 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 PRRG1O14668 218 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 B3GAT3O94766 335 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 MICAL2O94851 1124 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 ABLIM3O94929 683 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 PAPSS2O95340 614 aaPredicted RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 BAG4O95429 457 aaKnown RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 LRG1P02750 347 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 PRKCBP05771 671 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 CHRNB1P11230 501 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 ATF2P15336 505 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 PTPN2P17706 415 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 PMLP29590 882 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 GDI1P31150 447 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 BRCC3P46736 316 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 CXCL12P48061 93 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 STK3Q13188 491 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 SRSF5Q13243 272 aaKnown RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 NR5A1Q13285 461 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 PRPF4BQ13523 1007 aaKnown RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 SIM2Q14190 667 aaPredicted RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 MAPK6Q16659 721 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 UPP1Q16831 310 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 WDR44Q5JSH3 913 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 GLRA4Q5JXX5 417 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 EEF1DP3Q658K8 133 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 CPLX2Q6PUV4 134 aaKnown RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 MAEAQ7L5Y9 396 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 ZBTB8OSQ8IWT0 167 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 TCEAL8Q8IYN2 117 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 MCPH1Q8NEM0 835 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 ZNF461Q8TAF7 563 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 DEPDC1BQ8WUY9 529 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 BSNDQ8WZ55 320 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 FAM3CQ92520 227 aa5.65□□□□□ -1.5
SNRNP40-204ENST00000474025 SMARCD2Q92925 531 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms