RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 BFSP2Q13515 415 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 DSC3Q14574 896 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 MBTPS1Q14703 1052 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 HGSNATQ68CP4 663 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 ALKAL1Q6UXT8 129 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 LRRC8DQ7L1W4 858 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 IRF2BP2Q7Z5L9 587 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 ZMAT2Q96NC0 199 aaKnown RBP11.56□□□□□ -0.56
SP140-208ENST00000473711 ADAM2Q99965 735 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 DESI2Q9BSY9 194 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 GPR88Q9GZN0 384 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 APOBEC3GQ9HC16 384 aaKnown RBP11.56□□□□□ -0.56
SP140-208ENST00000473711 C1orf112Q9NSG2 853 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 FAM105AQ9NUU6 356 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 DPP3Q9NY33 737 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 ARHGAP20Q9P2F6 1191 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 NUB1Q9Y5A7 615 aa11.56□□□□□ -0.56
SP140-208ENST00000473711 EPN1Q9Y6I3 576 aaPredicted RBP11.56□□□□□ -0.56
SP140-208ENST00000473711 USP27XA6NNY8 438 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 TK2O00142 265 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 ITGB3P05106 788 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 ITGA4P13612 1032 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 CYLC1P35663 651 aaPredicted RBP11.55□□□□□ -0.56
SP140-208ENST00000473711 KCNJ6P48051 423 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 TLE2Q04725 743 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 SGSM1Q2NKQ1 1148 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 TRIM60Q495X7 471 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 TDRD12Q587J7 1177 aaKnown RBP11.55□□□□□ -0.56
SP140-208ENST00000473711 GLRA4Q5JXX5 417 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 NT5DC4Q86YG4 428 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 CCAR2Q8N163 923 aaKnown RBP11.55□□□□□ -0.56
SP140-208ENST00000473711 C1orf127Q8N9H9 656 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 LPPQ93052 612 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 CCDC42Q96M95 316 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 IMPG2Q9BZV3 1241 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 HAUS4Q9H6D7 363 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 AGAP1Q9UPQ3 857 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 DERAQ9Y315 318 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 C2CD2Q9Y426 696 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 UMODL1Q5DID0 1318 aa11.55□□□□□ -0.56
SP140-208ENST00000473711 SMIM28A0A1B0GU29 152 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 MEIS3P2A8K0S8 358 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 AKR1B10O60218 316 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 ZNF500O60304 480 aaPredicted RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 NDUFA10O95299 355 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 COL6A1P12109 1028 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 POLR2BP30876 1174 aaKnown RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 NOP14P78316 857 aaKnown RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 RBP5P82980 135 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 FAAP100Q0VG06 881 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 ZBTB6Q15916 424 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 XKR4Q5GH76 650 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 ENOSF1Q7L5Y1 443 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 ANKRD33Q7Z3H0 272 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 MRPL10Q7Z7H8 261 aaKnown RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 RTN4RL1Q86UN2 441 aaPredicted RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 CCDC170Q8IYT3 715 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 HACE1Q8IYU2 909 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 ANKLE1Q8NAG6 615 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 RNF169Q8NCN4 708 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 ACRBPQ8NEB7 543 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 BEST2Q8NFU1 509 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 C18orf25Q96B23 403 aaPredicted RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 PAWRQ96IZ0 340 aaKnown RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.54□□□□□ -0.56
SP140-208ENST00000473711 DEF6Q9H4E7 631 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 C11orf49Q9H6J7 331 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 SPTLC3Q9NUV7 552 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 SIX4Q9UIU6 781 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 PPP2R2CQ9Y2T4 447 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 R3HCC1Q9Y3T6 440 aaKnown RBP11.54□□□□□ -0.56
SP140-208ENST00000473711 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
SP140-208ENST00000473711 SSU72P8A0A1W2PR75 194 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 EIF3CLB5ME19 914 aaKnown RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 CYP26A1O43174 497 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 ZSCAN12O43309 604 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 NBNO60934 754 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 CCDC175P0C221 793 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 CCDC172P0C7W6 258 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 KRT5P13647 590 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 KCNE1P15382 129 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 PRKCIP41743 596 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 KIF11P52732 1056 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 GCNT1Q02742 428 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 PTK2Q05397 1052 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 CUL2Q13617 745 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 GPNMBQ14956 572 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 ASTE1Q2TB18 679 aaPredicted RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 ZNF699Q32M78 642 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 ZNF571Q7Z3V5 609 aaPredicted RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 REXO1L1PQ8IX06 675 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 FAM71AQ8IYT1 594 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms