RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 DNAJB4Q9UDY4 337 aa13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.25
TRAPPC12-217ENST00000473348 COL4A4P53420 1690 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 A0A1W2PQC6 194 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 ANO9A1A5B4 782 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 PODXLO00592 558 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 PPEF2O14830 753 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 LRRN2O75325 713 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 CST3P01034 146 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 SLC9A1P19634 815 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 RPL9P32969 192 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 KLK7P49862 253 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 CLCNKBP51801 687 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 MYL6P60660 151 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 RBP5P82980 135 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 KCNMA1Q12791 1236 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 ZNF699Q32M78 642 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 TRIM65Q6PJ69 517 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 COLGALT2Q8IYK4 626 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 CCDC150Q8NCX0 1101 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 PCMTD1Q96MG8 357 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 ZNF560Q96MR9 790 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 PAAF1Q9BRP4 392 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 PI4K2AQ9BTU6 479 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 LSM14BQ9BX40 385 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.51□□□□□ -0.253e-13■■■■■ 278.2
TRAPPC12-217ENST00000473348 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 INSL6Q9Y581 213 aa13.51□□□□□ -0.25
TRAPPC12-217ENST00000473348 PIRO00625 290 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 TLL1O43897 1013 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 ADCY5O95622 1261 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 ASS1P00966 412 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 PON1P27169 355 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 PBX1P40424 430 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 OR1G1P47890 313 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 UPP1Q16831 310 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 SGSM1Q2NKQ1 1148 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 SPOUT1Q5T280 376 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 LRRC52Q8N7C0 313 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 EHBP1Q8NDI1 1231 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 LMO3Q8TAP4 145 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 TAF4BQ92750 862 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 ELMO3Q96BJ8 720 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 MRFAP1L1Q96HT8 127 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 HPDLQ96IR7 371 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 NT5C1BQ96P26 610 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 XYLT2Q9H1B5 865 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 CWH43Q9H720 699 aa13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 PRG3Q9Y2Y8 225 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 MRPL42Q9Y6G3 142 aaKnown RBP13.5□□□□□ -0.25
TRAPPC12-217ENST00000473348 PTPRDP23468 1912 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 KIF4AO95239 1232 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 STAU1O95793 577 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 ATICP31939 592 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 BMP8BP34820 402 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 PNPLA4P41247 253 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 SLC11A1P49279 550 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 TAF6P49848 677 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 RABGGTBP53611 331 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 BCAR1P56945 870 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 APBA1Q02410 837 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 LRMPQ12912 555 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 MYO1EQ12965 1108 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 SV2CQ496J9 727 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 WDR44Q5JSH3 913 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 FAM109BQ6ICB4 259 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 SPOPLQ6IQ16 392 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 FIBCD1Q8N539 461 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 C3orf58Q8NDZ4 430 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 RAD9AQ99638 391 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 TMEM175Q9BSA9 504 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 APOBEC3GQ9HC16 384 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 SIX2Q9NPC8 291 aa13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC12-217ENST00000473348 ITIH6Q6UXX5 1313 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 GRXCR1A8MXD5 290 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 F8W810 466 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 TMEM189-UBE2V1I3L0A0 370 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 NRP1O14786 923 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 B3GAT3O94766 335 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 GALTP07902 379 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 LAG3P18627 525 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 PBX3P40426 434 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 TNNC1P63316 161 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 ZNF667Q5HYK9 610 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 DPY19L2P1Q6NXN4 242 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 SCARA5Q6ZMJ2 495 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 ARHGEF19Q8IW93 802 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 NEK11Q8NG66 645 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 HASPINQ8TF76 798 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 TATDN2Q93075 761 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 NIF3L1Q9GZT8 377 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms