RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 NGRNQ9NPE2 291 aaKnown RBP14.23□□□□□ -0.13
TPM3-216ENST00000473036 RBAKQ9NYW8 714 aaPredicted RBP14.23□□□□□ -0.13
TPM3-216ENST00000473036 CD207Q9UJ71 328 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 IRAK3Q9Y616 596 aa14.23□□□□□ -0.13
TPM3-216ENST00000473036 C2CD2LO14523 706 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 SPTLC1O15269 473 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 KINO60870 393 aaKnown RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 CLASP2O75122 1294 aaKnown RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 B3GAT3O94766 335 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 CNPP09543 421 aaKnown RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 CD44P16070 742 aaKnown RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 CYP3A5P20815 502 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 PRCPP42785 496 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 CASP4P49662 377 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 POU5F1Q01860 360 aaKnown RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 DSG1Q02413 1049 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 ADAM15Q13444 863 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 SMC1AQ14683 1233 aaKnown RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 LMBRD2Q68DH5 695 aaPredicted RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 RSPO2Q6UXX9 243 aaPredicted RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 GUF1Q8N442 669 aaKnown RBP14.22□□□□□ -0.13
TPM3-216ENST00000473036 RDH13Q8NBN7 331 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 GPT2Q8TD30 523 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 TMEM174Q8WUU8 243 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 UROC1Q96N76 676 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 ASB7Q9H672 318 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 TLE6Q9H808 572 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 SLC38A7Q9NVC3 462 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 CLEC1BQ9P126 229 aa14.22□□□□□ -0.13
TPM3-216ENST00000473036 USP34Q70CQ2 3546 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 TSC2P49815 1807 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 ANO9A1A5B4 782 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 PIRO00625 290 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 PDXKO00764 312 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 ADAM12O43184 909 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 LDHAP00338 332 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 RPL17P18621 184 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 FGFR3P22607 806 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 TKTP29401 623 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 RPL9P32969 192 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 NUBP1P53384 320 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 PMS1P54277 932 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 SNRPFP62306 86 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 TMEM132DQ14C87 1099 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 SNRNP35Q16560 246 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 CAMK4Q16566 473 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 ZNF658Q5TYW1 1059 aaPredicted RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 FAM171A1Q5VUB5 890 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 C9orf57Q5W0N0 161 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 PDE12Q6L8Q7 609 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 PRSS55Q6UWB4 352 aaPredicted RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 TRIM67Q6ZTA4 783 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 EFHBQ8N7U6 833 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 OR5B17Q8NGF7 314 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 LNX1Q8TBB1 728 aaPredicted RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 NOC3LQ8WTT2 800 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 SLC22A17Q8WUG5 538 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 SMARCE1Q969G3 411 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 MSLNLQ96KJ4 702 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 KLHL5Q96PQ7 755 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 GSDMAQ96QA5 445 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 MUTYHQ9UIF7 546 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 HOOK1Q9UJC3 728 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 UBQLN1Q9UMX0 589 aaKnown RBP14.21□□□□□ -0.13
TPM3-216ENST00000473036 TRAF3IP3Q9Y228 551 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 DERAQ9Y315 318 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 C2CD2Q9Y426 696 aa14.21□□□□□ -0.13
TPM3-216ENST00000473036 SF3B1O75533 1304 aaKnown RBP eCLIP14.2□□□□□ -0.147e-7■■■■■ 108.6
TPM3-216ENST00000473036 MTCL1Q9Y4B5 1905 aaKnown RBP14.2□□□□□ -0.14
TPM3-216ENST00000473036 CARNS1A5YM72 827 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 NR3C1P04150 777 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 AARSP49588 968 aaKnown RBP eCLIP14.2□□□□□ -0.14
TPM3-216ENST00000473036 CYP24A1Q07973 514 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 MORC3Q14149 939 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 CBX2Q14781 532 aaPredicted RBP14.2□□□□□ -0.14
TPM3-216ENST00000473036 USP41Q3LFD5 358 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 COBLL1Q53SF7 1204 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 HS2ST1Q7LGA3 356 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 SLC9A9Q8IVB4 645 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 SUGP1Q8IWZ8 645 aaKnown RBP14.2□□□□□ -0.14
TPM3-216ENST00000473036 CD302Q8IX05 232 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 C1orf127Q8N9H9 656 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 XXYLT1Q8NBI6 393 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 SMRP1Q8NCR6 262 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 ZNF516Q92618 1163 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
TPM3-216ENST00000473036 BORCS6Q96GS4 357 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 RXFP1Q9HBX9 757 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 DPP3Q9NY33 737 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 SIX4Q9UIU6 781 aa14.2□□□□□ -0.14
TPM3-216ENST00000473036 BARX2Q9UMQ3 279 aaPredicted RBP14.2□□□□□ -0.14
TPM3-216ENST00000473036 TMEM221A6NGB7 291 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 ZNF233A6NK53 670 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 LOC730098B7Z3J9 87 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 PPP1R3GB7ZBB8 358 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 M0R296 226 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 BIN1O00499 593 aa14.19□□□□□ -0.14
TPM3-216ENST00000473036 KIAA0391O15091 583 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms