RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ALG6Q9Y672 507 aa8.18□□□□□ -1.1
CCDC171-205ENST00000472806 DICER1Q9UPY3 1922 aaKnown RBP8.18□□□□□ -1.1
CCDC171-205ENST00000472806 SSC5DA1L4H1 1573 aa8.18□□□□□ -1.1
CCDC171-205ENST00000472806 A0A0G2JMZ2 1700 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 WDR90Q96KV7 1748 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 A0A0G2JLL6 359 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 LOC100996750A0A140TA64 210 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 LRRIQ4A6NIV6 560 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PODXLO00592 558 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CYP26A1O43174 497 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 SPOPO43791 374 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 RPS6KA5O75582 802 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 SGPL1O95470 568 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 FGGP02679 453 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CYP1A2P05177 515 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 GLI1P08151 1106 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 MYBL2P10244 700 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 DLATP10515 647 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 KRT5P13647 590 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CYP11B1P15538 503 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CAPN2P17655 700 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 TNNI1P19237 187 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 UBA1P22314 1058 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CTNNA2P26232 953 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CHRNA3P32297 505 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 MAN1A1P33908 653 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ACTN2P35609 894 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 HSPA9P38646 679 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PIK3CAP42336 1068 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 SLC1A1P43005 524 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 STAT5BP51692 787 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CDR1P51861 262 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PTENP60484 403 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 FMO1Q01740 532 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PRPF4BQ13523 1007 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 TFDP1Q14186 410 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 MXD4Q14582 209 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ZACNQ401N2 412 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 LIN9Q5TKA1 542 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PRAMEF18Q5VWM3 479 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 SLC39A4Q6P5W5 647 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 SEPT14Q6ZU15 432 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 TRMT1LQ7Z2T5 733 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PRRT2Q7Z6L0 340 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CROCCP2Q86T23 111 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 NOP9Q86U38 636 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 GSPT2Q8IYD1 628 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ARFGAP2Q8N6H7 521 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 OLIG1Q8TAK6 271 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ZNF564Q8TBZ8 553 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PLEKHO2Q8TD55 490 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CASKIN2Q8WXE0 1202 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ZNF653Q96CK0 615 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ARHGEF26Q96DR7 871 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 RNPC3Q96LT9 517 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 KREMEN1Q96MU8 473 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 KCTD15Q96SI1 283 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 CGRRF1Q99675 332 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 SH3GL2Q99962 352 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ZSWIM1Q9BR11 485 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 SH2D3AQ9BRG2 576 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ARHGAP9Q9BRR9 750 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 MSTO1Q9BUK6 570 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 KIFC3Q9BVG8 833 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 MRPL4Q9BYD3 311 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 KRTAP4-6Q9BYQ5 205 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 ZCCHC17Q9NP64 241 aaKnown RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 OSGEPQ9NPF4 335 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 AVENQ9NQS1 362 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 RBAKQ9NYW8 714 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC171-205ENST00000472806 PCDHB2Q9Y5E7 798 aa8.17□□□□□ -1.1
CCDC171-205ENST00000472806 EP400Q96L91 3159 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 ASB14A6NK59 587 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 HMGB1P1B2RPK0 211 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 NOP56O00567 594 aaKnown RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 ASAP2O43150 1006 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 SPINT1O43278 529 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 ADCY3O60266 1144 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 PHACTR2O75167 634 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 MAFO75444 373 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 FARP2O94887 1054 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 ZBTB48P10074 688 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 CHRNB2P17787 502 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 GLRA2P23416 452 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 CETN2P41208 172 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 NSFP46459 744 aaKnown RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 CARSP49589 748 aaKnown RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 DRG2P55039 364 aaKnown RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 RWDD2BP57060 319 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 RNASE9P60153 205 aaKnown RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 YWHAEP62258 255 aaKnown RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 PPIL2Q13356 520 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 BIRC3Q13489 604 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 KCTD2Q14681 263 aa8.16□□□□□ -1.1
CCDC171-205ENST00000472806 TARBP2Q15633 366 aaKnown RBP8.16□□□□□ -1.1
CCDC171-205ENST00000472806 CLEC16AQ2KHT3 1053 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms