RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MAN2A1Q16706 1144 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 CD276Q5ZPR3 534 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ZNF385CQ66K41 422 aaPredicted RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 NUGGCQ68CJ6 796 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 CRTC1Q6UUV9 634 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 TMC6Q7Z403 805 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 SLC15A4Q8N697 577 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 MYRFLQ96LU7 910 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 C7orf25Q9BPX7 421 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 MRPL46Q9H2W6 279 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 NELFAQ9H3P2 528 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 AKTIPQ9H8T0 292 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 LRRC4CQ9HCJ2 640 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 TLR9Q9NR96 1032 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ORC3Q9UBD5 711 aaPredicted RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 ASH2LQ9UBL3 628 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ADD3Q9UEY8 706 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 KCNH3Q9ULD8 1083 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 PCDHB6Q9Y5E3 794 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ACTL7AQ9Y615 435 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 MAGI2Q86UL8 1455 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 WDR7Q9Y4E6 1490 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 EFCAB5A4FU69 1503 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 FADS2P1A8MWK0 482 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 C1QTNF9BB2RNN3 333 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 STX16-NPEPL1H3BU86 382 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 BTN3A1O00481 513 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 STX16O14662 325 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 PSPNO60542 156 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 CELA2BP08218 269 aaPredicted RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 COL8A1P27658 744 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 CD6P30203 668 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ELF1P32519 619 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 HOXD13P35453 343 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 OXCT1P55809 520 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 MGAT2Q10469 447 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 FSTL1Q12841 308 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 GRM4Q14833 912 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 TTC38Q5R3I4 469 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 DCAF12L1Q5VU92 463 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 KIAA1841Q6NSI8 718 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 BORAQ6PGQ7 559 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 TMCO3Q6UWJ1 677 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 LIPIQ6XZB0 460 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 CEP128Q6ZU80 1094 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 NAT8LQ8N9F0 302 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.06□□□□□ -1.92
XRN1-210ENST00000472697 RUBCNQ92622 972 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 STAMQ92783 540 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 PAWRQ96IZ0 340 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 NOL10Q9BSC4 688 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 TRIM54Q9BYV2 358 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 BTBD1Q9H0C5 482 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 CHST8Q9H2A9 424 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 PABPC3Q9H361 631 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 GHITMQ9H3K2 345 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 OLA1Q9NTK5 396 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 TDP1Q9NUW8 608 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 HAUS2Q9NVX0 235 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 PRR13Q9NZ81 148 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 USP36Q9P275 1121 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 NFKBIL1Q9UBC1 381 aaPredicted RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 AFF4Q9UHB7 1163 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 ZNF112Q9UJU3 913 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 DENND2AQ9ULE3 1009 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 HSF4Q9ULV5 492 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 NAALADL1Q9UQQ1 740 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 CNTNAP5Q8WYK1 1306 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 TNIKQ9UKE5 1360 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ABCA9Q8IUA7 1624 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 H7BY64 318 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 H7C4K7 107 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 K7ENM7 598 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 SYT5O00445 386 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 NPHS1O60500 1241 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 RTN3O95197 1032 aaPredicted RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 NTSR1P30989 418 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ALDH1A3P47895 512 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 EPHA5P54756 1037 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ROR1Q01973 937 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 SRSF11Q05519 484 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 PRKG2Q13237 762 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 FGL2Q14314 439 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 MAPKAPK3Q16644 382 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ZNF827Q17R98 1081 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 MUM1L1Q5H9M0 696 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ANKRD34AQ69YU3 496 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 SYNE3Q6ZMZ3 975 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 MIGA2Q7L4E1 593 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 SLCO6A1Q86UG4 719 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ZNF280BQ86YH2 543 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 PIK3C3Q8NEB9 887 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 FLCNQ8NFG4 579 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 OTUD7AQ8TE49 926 aaPredicted RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 TRAPPC12Q8WVT3 735 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ST8SIA4Q92187 359 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 SH3KBP1Q96B97 665 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 IQCDQ96DY2 449 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 ZSWIM3Q96MP5 696 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 GPR20Q99678 358 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms