RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 TNNC2P02585 160 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 CNPP09543 421 aaKnown RBP15.36■□□□□ 0.05
BRCA1-211ENST00000472490 GTF2F1P35269 517 aaKnown RBP eCLIP15.36■□□□□ 0.05
BRCA1-211ENST00000472490 PSMD6Q15008 389 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 DUOXA2Q1HG44 320 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 EDRF1Q3B7T1 1238 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 C9orf57Q5W0N0 161 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 WDR49Q8IV35 697 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 EFCAB13Q8IY85 973 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 TRIML1Q8N9V2 468 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 SUSD3Q96L08 255 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 ZNF560Q96MR9 790 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 TSG101Q99816 390 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 PDE11AQ9HCR9 933 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 DMAC2Q9NW81 257 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 ITGA11Q9UKX5 1188 aa15.36■□□□□ 0.05
BRCA1-211ENST00000472490 ANO9A1A5B4 782 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 H7C4K7 107 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 PIRO00625 290 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 PSMA7O14818 248 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 HOXB8P17481 243 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-211ENST00000472490 TNNI1P19237 187 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 NR2F2P24468 414 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 PRCPP42785 496 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 BRCC3P46736 316 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 AP3M2P53677 418 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 CYP24A1Q07973 514 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 LEXMQ3ZCV2 418 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 RTP2Q5QGT7 225 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 CEP135Q66GS9 1140 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 CD300LGQ6UXG3 332 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 DSTYKQ6XUX3 929 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 ZSWIM2Q8NEG5 633 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 ERCC4Q92889 916 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-211ENST00000472490 ASB2Q96Q27 587 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 OXCT2Q9BYC2 517 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-211ENST00000472490 LMBRD1Q9NUN5 540 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 INTS13Q9NVM9 706 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 DZANK1Q9NVP4 752 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 MAN1B1Q9UKM7 699 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 HCFC2Q9Y5Z7 792 aa15.35■□□□□ 0.05
BRCA1-211ENST00000472490 PLXNA4Q9HCM2 1894 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 MAPK13O15264 365 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 TEX28O15482 410 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 LINC01565O15544 149 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 GLUD1P00367 558 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 DLATP10515 647 aaKnown RBP15.34■□□□□ 0.05
BRCA1-211ENST00000472490 AARSP49588 968 aaKnown RBP eCLIP15.34■□□□□ 0.05
BRCA1-211ENST00000472490 TAF6P49848 677 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 CLCN4P51793 760 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 LILRA4P59901 499 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 RBP5P82980 135 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 LRRC63Q05C16 580 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 ADAM9Q13443 819 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 KCNC3Q14003 757 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 PSMD5Q16401 504 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 CAMK4Q16566 473 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 SV2CQ496J9 727 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 SMYD4Q8IYR2 804 aaPredicted RBP15.34■□□□□ 0.05
BRCA1-211ENST00000472490 ADSSL1Q8N142 457 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 CSGALNACT2Q8N6G5 542 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 LRRC52Q8N7C0 313 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 LNX1Q8TBB1 728 aaPredicted RBP15.34■□□□□ 0.05
BRCA1-211ENST00000472490 CCDC127Q96BQ5 260 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 DHTKD1Q96HY7 919 aaPredicted RBP15.34■□□□□ 0.05
BRCA1-211ENST00000472490 B3GALT6Q96L58 329 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 PRDM6Q9NQX0 595 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 KIAA1468Q9P260 1216 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 DSEQ9UL01 958 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 PCDHB8Q9UN66 801 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 BACE2Q9Y5Z0 518 aa15.34■□□□□ 0.05
BRCA1-211ENST00000472490 TDRD15B5MCY1 1934 aaKnown RBP15.33■□□□□ 0.05
BRCA1-211ENST00000472490 I3L4J1 428 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 M0QZQ0 153 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 CETN3O15182 167 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 TBX10O75333 385 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 ITGB3P05106 788 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 KRT19P08727 400 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 ODC1P11926 461 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 TKTP29401 623 aaKnown RBP15.33■□□□□ 0.04
BRCA1-211ENST00000472490 PSMC2P35998 433 aaKnown RBP15.33■□□□□ 0.04
BRCA1-211ENST00000472490 LTBRP36941 435 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 GUCY2FP51841 1108 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 FKBP3Q00688 224 aaKnown RBP15.33■□□□□ 0.04
BRCA1-211ENST00000472490 YWHAHQ04917 246 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-211ENST00000472490 MYO1EQ12965 1108 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 VARS2Q5ST30 1063 aaKnown RBP15.33■□□□□ 0.04
BRCA1-211ENST00000472490 CENPPQ6IPU0 288 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 LLGL2Q6P1M3 1020 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 PRSS55Q6UWB4 352 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-211ENST00000472490 INTS8Q75QN2 995 aaKnown RBP15.33■□□□□ 0.04
BRCA1-211ENST00000472490 C1orf127Q8N9H9 656 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 CGRRF1Q99675 332 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 MTMR12Q9C0I1 747 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 NUP62CLQ9H1M0 184 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 CLSTN2Q9H4D0 955 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 MTRRQ9UBK8 725 aa15.33■□□□□ 0.04
BRCA1-211ENST00000472490 CD207Q9UJ71 328 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms