RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-208	ENST00000471308	FEZ2	Q9UHY8	353 aa	Predicted RBP	18.04	■□□□□ 0.48
PCBP4-208	ENST00000471308	PAEP	P09466	180 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	RARG	P13631	454 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	IRX3	P78415	501 aa	Predicted RBP	18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	BYSL	Q13895	437 aa	Known RBP	18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	SURF1	Q15526	300 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	ZBTB41	Q5SVQ8	909 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	DDX27	Q96GQ7	796 aa	Known RBP	18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	PTPN22	Q9Y2R2	807 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	FAM107A	O95990	144 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	EDN1	P05305	212 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	MAGOH	P61326	146 aa	Known RBP	18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	IRX5	P78411	483 aa	Predicted RBP	18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	ADCY2	Q08462	1091 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	MXD4	Q14582	209 aa	Predicted RBP	18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	KCTD19	Q17RG1	926 aa	Predicted RBP	18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	PLEKHA7	Q6IQ23	1121 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	NLRP14	Q86W24	1093 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	RHOT1	Q8IXI2	618 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	OR5B17	Q8NGF7	314 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	C11orf70	Q9BRQ4	267 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	TMEM109	Q9BVC6	243 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	CCDC113	Q9H0I3	377 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	NUB1	Q9Y5A7	615 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	UMODL1	Q5DID0	1318 aa		18.03	■□□□□ 0.48
PCBP4-208	ENST00000471308	THAP12	O43422	761 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	SLC25A27	O95847	323 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	GAS8	O95995	478 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	MAGEA9	P43362	315 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	ZNF132	P52740	706 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	KRT17	Q04695	432 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	SKIDA1	Q1XH10	827 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	GADL1	Q6ZQY3	521 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	MICALCL	Q6ZW33	695 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	ZBTB8OS	Q8IWT0	167 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	C10orf67	Q8IYJ2	551 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	UBR7	Q8N806	425 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	MYCBPAP	Q8TBZ2	947 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	PRPF31	Q8WWY3	499 aa	Known RBP	18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	TRIM7	Q9C029	511 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	C2orf40	Q9H1Z8	148 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	RABEP2	Q9H5N1	569 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308	FAM169A	Q9Y6X4	670 aa		18.02	■□□□□ 0.48
PCBP4-208	ENST00000471308		A0A0G2JLL6	359 aa	Predicted RBP	18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	MSC	O60682	206 aa		18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	ASS1	P00966	412 aa	Known RBP	18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	KCNJ1	P48048	391 aa		18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	PTK6	Q13882	451 aa		18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	PRRT2	Q7Z6L0	340 aa	Predicted RBP	18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	KATNAL2	Q8IYT4	538 aa		18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	RNF25	Q96BH1	459 aa	Predicted RBP	18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	JPH2	Q9BR39	696 aa	Predicted RBP	18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	STMN4	Q9H169	189 aa	Predicted RBP	18.02	■□□□□ 0.47
PCBP4-208	ENST00000471308	SBF1	O95248	1867 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308		E7EVH7	732 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	IRF6	O14896	467 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	OGT	O15294	1046 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	FAM189A1	O60320	539 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	LGR5	O75473	907 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	LSM8	O95777	96 aa	Known RBP	18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	HARS	P12081	509 aa	Known RBP	18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	ITIH2	P19823	946 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	IREB2	P48200	963 aa	Known RBP	18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	CAV1	Q03135	178 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	MAMLD1	Q13495	774 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	SLC29A2	Q14542	456 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	C6orf118	Q5T5N4	469 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	TRMT10C	Q7L0Y3	403 aa	Known RBP	18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	ZNF473	Q8WTR7	871 aa	Known RBP	18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	SNF8	Q96H20	258 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	CCT8L2	Q96SF2	557 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	PARVA	Q9NVD7	372 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	GGA2	Q9UJY4	613 aa		18.01	■□□□□ 0.47
PCBP4-208	ENST00000471308	RIPK2	O43353	540 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	CAND2	O75155	1236 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	SHBG	P04278	402 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	MAPK6	Q16659	721 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	ARMC9	Q7Z3E5	817 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	PASD1	Q8IV76	773 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	C1orf54	Q8WWF1	131 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	ACO2	Q99798	780 aa	Known RBP	18	■□□□□ 0.47
PCBP4-208	ENST00000471308	DCLK3	Q9C098	648 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	SEMA4A	Q9H3S1	761 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	TRIM66	O15016	1216 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	TRAPPC3	O43617	180 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	PRKCB	P05771	671 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	CALB1	P05937	261 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	CETN2	P41208	172 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	MCL1	Q07820	350 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	MMS22L	Q6ZRQ5	1243 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	PLPPR4	Q7Z2D5	763 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	CCDC50	Q8IVM0	306 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	SULF1	Q8IWU6	871 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	EXD1	Q8NHP7	514 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	DCPS	Q96C86	337 aa	Known RBP	18	■□□□□ 0.47
PCBP4-208	ENST00000471308	TCHP	Q9BT92	498 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	NIF3L1	Q9GZT8	377 aa		18	■□□□□ 0.47
PCBP4-208	ENST00000471308	ADARB2	Q9NS39	739 aa	Known RBP	18	■□□□□ 0.47
PCBP4-208	ENST00000471308	ASIC3	Q9UHC3	531 aa		18	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms