RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 WNT16Q9UBV4 365 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 CDH7Q9ULB5 785 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 KCNH3Q9ULD8 1083 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 STYXL1Q9Y6J8 313 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 DOCK8Q8NF50 2099 aa14.68□□□□□ -0.06
HMGN1-211ENST00000471260 ARHGEF37A1IGU5 675 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 LACTBL1A8MY62 500 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 ANHXE9PGG2 379 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 M0QZQ0 153 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 GAP43P17677 238 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 NMT1P30419 496 aaKnown RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 TNFSF9P41273 254 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 NASPP49321 788 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 CEBPZQ03701 1054 aaKnown RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 POSTNQ15063 836 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 ENOX2Q16206 610 aaKnown RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 ZNF280DQ6N043 979 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 RSPO2Q6UXX9 243 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 GET4Q7L5D6 327 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 TCEAL8Q8IYN2 117 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 SLC44A3Q8N4M1 653 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 CLIC6Q96NY7 704 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 USP28Q96RU2 1077 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 MSTO1Q9BUK6 570 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 MFSD1Q9H3U5 465 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 SMOC2Q9H3U7 446 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 ASB7Q9H672 318 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 GRPEL1Q9HAV7 217 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 AVENQ9NQS1 362 aaPredicted RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 TUBGCP4Q9UGJ1 667 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 CPSF3Q9UKF6 684 aaKnown RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 EXOC7Q9UPT5 735 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 DERAQ9Y315 318 aa14.67□□□□□ -0.06
HMGN1-211ENST00000471260 PDCD11Q14690 1871 aaKnown RBP14.67□□□□□ -0.06
HMGN1-211ENST00000471260 WDR27A2RRH5 827 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 CCL16O15467 120 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 PPP6R2O75170 966 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 OAZ2O95190 189 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 PDGFBP01127 241 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-211ENST00000471260 SRFP11831 508 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 AARSP49588 968 aaKnown RBP eCLIP14.66□□□□□ -0.06
HMGN1-211ENST00000471260 VCPP55072 806 aaKnown RBP14.66□□□□□ -0.06
HMGN1-211ENST00000471260 YWHAHQ04917 246 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-211ENST00000471260 CTXN3Q4LDR2 81 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 SPATA1Q5VX52 437 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 ASTLQ6HA08 431 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-211ENST00000471260 SLC39A4Q6P5W5 647 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 MTSS1LQ765P7 747 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 DYMQ7RTS9 669 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 LINC00301Q8NCQ3 95 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 PRSS33Q8NF86 280 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 BEST2Q8NFU1 509 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 ZNF396Q96N95 335 aaPredicted RBP14.66□□□□□ -0.06
HMGN1-211ENST00000471260 OLFML3Q9NRN5 406 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 FBXL5Q9UKA1 691 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 FBXL21Q9UKT6 434 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 POLIQ9UNA4 740 aa14.66□□□□□ -0.06
HMGN1-211ENST00000471260 KMT2EQ8IZD2 1858 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 MYMKA6NI61 221 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 PPP1R37O75864 691 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 LRG1P02750 347 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 STAT6P42226 847 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 TCF15Q12870 199 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 HTR4Q13639 388 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 ALCAMQ13740 583 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 PABPC1LQ4VXU2 614 aaKnown RBP14.65□□□□□ -0.06
HMGN1-211ENST00000471260 ZC2HC1CQ53FD0 456 aaPredicted RBP14.65□□□□□ -0.06
HMGN1-211ENST00000471260 ADALQ6DHV7 355 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 SFR1Q86XK3 245 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 NT5DC4Q86YG4 428 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 RSAD2Q8WXG1 361 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 FGF13Q92913 245 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 DNAJC19Q96DA6 116 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 STRA6Q9BX79 667 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 LRRC27Q9C0I9 530 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 MRPL44Q9H9J2 332 aaKnown RBP14.65□□□□□ -0.06
HMGN1-211ENST00000471260 DNMT3BQ9UBC3 853 aaKnown RBP14.65□□□□□ -0.06
HMGN1-211ENST00000471260 AFF4Q9UHB7 1163 aaKnown RBP14.65□□□□□ -0.06
HMGN1-211ENST00000471260 AGO2Q9UKV8 859 aaKnown RBP14.65□□□□□ -0.06
HMGN1-211ENST00000471260 C2CD2Q9Y426 696 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 PCDHB13Q9Y5F0 798 aa14.65□□□□□ -0.06
HMGN1-211ENST00000471260 PRRG1O14668 218 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 GALR2O43603 387 aaPredicted RBP14.64□□□□□ -0.07
HMGN1-211ENST00000471260 MICAL2O94851 1124 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 YEATS4O95619 227 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 PTPN2P17706 415 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 TYMPP19971 482 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 SPAG1Q07617 926 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 STK38Q15208 465 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 USP37Q86T82 979 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 RTP3Q9BQQ7 232 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 CUEDC2Q9H467 287 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 CYP4F11Q9HBI6 524 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 SLC2A4RGQ9NR83 387 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 NUMBLQ9Y6R0 609 aa14.64□□□□□ -0.07
HMGN1-211ENST00000471260 DOCK6Q96HP0 2047 aa14.63□□□□□ -0.07
HMGN1-211ENST00000471260 FRMD3A2A2Y4 597 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms