RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	HGSNAT	Q68CP4	663 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	IRF2BP2	Q7Z5L9	587 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	ZSCAN30	Q86W11	494 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	FAM71A	Q8IYT1	594 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	CCDC170	Q8IYT3	715 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	LRRC52	Q8N7C0	313 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	GSTCD	Q8NEC7	633 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	DBF4B	Q8NFT6	615 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	RPS6KC1	Q96S38	1066 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	PPP1R12C	Q9BZL4	782 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	NIF3L1	Q9GZT8	377 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	CXCL16	Q9H2A7	254 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	FAM124B	Q9H5Z6	455 aa	Predicted RBP	9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	ELAC1	Q9H777	363 aa	Known RBP	9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	RSAD1	Q9HA92	442 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	KLK14	Q9P0G3	267 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	PYCARD	Q9ULZ3	195 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	NUB1	Q9Y5A7	615 aa		9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	BZW2	Q9Y6E2	419 aa	Known RBP	9.36	□□□□□ -0.91
HDLBP-233	ENST00000470710	SOWAHD	A6NJG2	315 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	MEIS3P2	A8K0S8	358 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	FOXN3	O00409	490 aa	Predicted RBP	9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	ENPP3	O14638	875 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	TIMP1	P01033	207 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	KRT19	P08727	400 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	P4HA1	P13674	534 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	LRPAP1	P30533	357 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	MLH1	P40692	756 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	PNPLA4	P41247	253 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	GUCY2F	P51841	1108 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	CCL23	P55773	120 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	MYO1E	Q12965	1108 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	ARHGAP44	Q17R89	818 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	GLRA4	Q5JXX5	417 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	C9orf57	Q5W0N0	161 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	SCARA3	Q6AZY7	606 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	SPOPL	Q6IQ16	392 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	UBR7	Q8N806	425 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	KIAA1524	Q8TCG1	905 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	RSPH1	Q8WYR4	309 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	KAT5	Q92993	513 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	LPP	Q93052	612 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	C18orf25	Q96B23	403 aa	Predicted RBP	9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	SCLY	Q96I15	445 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	HPDL	Q96IR7	371 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	ZFP42	Q96MM3	310 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	GAD1	Q99259	594 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	BCO2	Q9BYV7	579 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	CYP3A43	Q9HB55	503 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.35	□□□□□ -0.91	6e-9	■■■■□ 19.7
HDLBP-233	ENST00000470710	KCND1	Q9NSA2	647 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	TMEM161A	Q9NX61	479 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	ARHGAP20	Q9P2F6	1191 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	TUBGCP4	Q9UGJ1	667 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	AGAP1	Q9UPQ3	857 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	CNTN6	Q9UQ52	1028 aa		9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	R3HCC1	Q9Y3T6	440 aa	Known RBP	9.35	□□□□□ -0.91
HDLBP-233	ENST00000470710	TRIM43B	A6NCK2	446 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	RBAK-RBAKDN	I3L0D1	243 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	PIR	O00625	290 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	EVI5	O60447	810 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	OFD1	O75665	1012 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	GFPT2	O94808	682 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	TH	P07101	528 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	PFKM	P08237	780 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	ACO1	P21399	889 aa	Known RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	RPL9	P32969	192 aa	Known RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	CYLC1	P35663	651 aa	Predicted RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	EIF4A3	P38919	411 aa	Known RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	ASPA	P45381	313 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	YWHAE	P62258	255 aa	Known RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	SOX4	Q06945	474 aa	Predicted RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	KLHL30	Q0D2K2	578 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	GRIK3	Q13003	919 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	NAB2	Q15742	525 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	TCTN1	Q2MV58	587 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	ASTE1	Q2TB18	679 aa	Predicted RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	ZNF667	Q5HYK9	610 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	CNKSR3	Q6P9H4	555 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	GLB1L	Q6UWU2	654 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	RAD9B	Q6WBX8	426 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	RNF169	Q8NCN4	708 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	TRIM43	Q96BQ3	446 aa	Predicted RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	VWCE	Q96DN2	955 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	ZNF560	Q96MR9	790 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	CHP1	Q99653	195 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	ARID3A	Q99856	593 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	RALGAPA2	Q2PPJ7	1873 aa		9.34	□□□□□ -0.91
HDLBP-233	ENST00000470710	HOXA2	O43364	376 aa		9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	NDUFA10	O95299	355 aa		9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	LCA5L	O95447	670 aa		9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	PLEK	P08567	350 aa	Predicted RBP	9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	PNMA6A	P0CW24	399 aa	Predicted RBP	9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	PAX3	P23760	479 aa		9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	SCNN1G	P51170	649 aa		9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	ZNF132	P52740	706 aa		9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	BPIFB4	P59827	614 aa		9.33	□□□□□ -0.92
HDLBP-233	ENST00000470710	ARID5A	Q03989	594 aa		9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms