RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 H3BNC9 293 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 RFXAPO00287 272 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 SPTLC1O15269 473 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 GRM6O15303 877 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 TADA2AO75478 443 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 VNN1O95497 513 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 CAVIN2O95810 425 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 CST3P01034 146 aaPredicted RBP11.39□□□□□ -0.59
SMC1A-206ENST00000470241 ZNF18P17022 549 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 GTF2H1P32780 548 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 BRCC3P46736 316 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 AARSP49588 968 aaKnown RBP eCLIP11.39□□□□□ -0.596e-7■□□□□ 9.5
SMC1A-206ENST00000470241 RBP5P82980 135 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 KCNJ12Q14500 433 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 CBWD6Q4V339 395 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 TCP11X2Q5H9J9 407 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 CBWD3Q5JTY5 395 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 CBWD5Q5RIA9 395 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 TCERG1LQ5VWI1 586 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 FAM114A1Q8IWE2 563 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 RNF168Q8IYW5 571 aaPredicted RBP11.39□□□□□ -0.59
SMC1A-206ENST00000470241 SPPL3Q8TCT6 385 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 HASPINQ8TF76 798 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 TMEM169Q96HH4 297 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 C11orf84Q9BUA3 381 aaPredicted RBP11.39□□□□□ -0.59
SMC1A-206ENST00000470241 GPR62Q9BZJ7 368 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 MMRN2Q9H8L6 949 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 TMEM8AQ9HCN3 771 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 ALG13Q9NP73 1137 aaKnown RBP11.39□□□□□ -0.59
SMC1A-206ENST00000470241 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
SMC1A-206ENST00000470241 ADAM28Q9UKQ2 775 aa11.39□□□□□ -0.59
SMC1A-206ENST00000470241 GBF1Q92538 1859 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 SMTNL1A8MU46 457 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 I3L4J1 428 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 STX10O60499 249 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 LPXNO60711 386 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 KRT19P08727 400 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 DNAJB1P25685 340 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 EEF1GP26641 437 aaKnown RBP11.38□□□□□ -0.59
SMC1A-206ENST00000470241 MTIF2P46199 727 aaKnown RBP11.38□□□□□ -0.59
SMC1A-206ENST00000470241 MXI1P50539 228 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 LILRA4P59901 499 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 BIRC3Q13489 604 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 GPM6BQ13491 265 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 CAMK1Q14012 370 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 GRIN2CQ14957 1233 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 TIGD5Q53EQ6 642 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 KRT39Q6A163 491 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 FUT10Q6P4F1 479 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 TAS1R1Q7RTX1 841 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 DDX53Q86TM3 631 aaKnown RBP11.38□□□□□ -0.59
SMC1A-206ENST00000470241 LUZP1Q86V48 1076 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 CREBRFQ8IUR6 639 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 LRRC52Q8N7C0 313 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 FAM200AQ8TCP9 573 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 TAS1R2Q8TE23 839 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 XYLT2Q9H1B5 865 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 LZTS1Q9Y250 596 aa11.38□□□□□ -0.59
SMC1A-206ENST00000470241 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMC1A-206ENST00000470241 CITO14578 2027 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 BECN2A8MW95 431 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 PHACTR2O75167 634 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 LRRN2O75325 713 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 HLA-DRAP01903 254 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 AFPP02771 609 aaKnown RBP11.37□□□□□ -0.59
SMC1A-206ENST00000470241 ATP1A3P13637 1013 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 FMO5P49326 533 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 TAF6P49848 677 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMC1A-206ENST00000470241 MYL6P60660 151 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 KRT17Q04695 432 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 UBE3AQ05086 875 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 TRPC3Q13507 836 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 NCOA4Q13772 614 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 KRT31Q15323 416 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 MAN2A1Q16706 1144 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 ZNF697Q5TEC3 545 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 APTXQ7Z2E3 356 aaKnown RBP11.37□□□□□ -0.59
SMC1A-206ENST00000470241 GDPD5Q8WTR4 605 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 POF1BQ8WVV4 589 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 SEMA4DQ92854 862 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 HPDLQ96IR7 371 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 SUSD3Q96L08 255 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 ZNF560Q96MR9 790 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 HERC2P3Q9BVR0 1158 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 TAB2Q9NYJ8 693 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 COQ4Q9Y3A0 265 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 ANK1P16157 1881 aa11.37□□□□□ -0.59
SMC1A-206ENST00000470241 SF3B1O75533 1304 aaKnown RBP eCLIP11.36□□□□□ -0.594e-12■■■■■ 336
SMC1A-206ENST00000470241 KPNA7A9QM74 516 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 M0QZQ0 153 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 PMM2O15305 246 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 N4BP1O75113 896 aaKnown RBP11.36□□□□□ -0.59
SMC1A-206ENST00000470241 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
SMC1A-206ENST00000470241 SOD2P04179 222 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
SMC1A-206ENST00000470241 FGFR3P22607 806 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms