RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 NPHP3-ACAD11A0A0J9YXS1 232 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 TTC26A0AVF1 554 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 DCNP07585 359 aaKnown RBP19.06■□□□□ 0.64
COL7A1-208ENST00000470076 CXCL8P10145 99 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 CACNB1Q02641 598 aaPredicted RBP19.06■□□□□ 0.64
COL7A1-208ENST00000470076 SLC5A9Q2M3M2 681 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 LARP1BQ659C4 914 aaKnown RBP19.06■□□□□ 0.64
COL7A1-208ENST00000470076 GPBP1Q86WP2 473 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 DDX12PQ92771 950 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 REEP2Q9BRK0 252 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 SEMA4AQ9H3S1 761 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 TUBGCP4Q9UGJ1 667 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 PCDHB8Q9UN66 801 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 INSL5Q9Y5Q6 135 aa19.06■□□□□ 0.64
COL7A1-208ENST00000470076 HNRNPDLO14979 420 aaKnown RBP19.05■□□□□ 0.64
COL7A1-208ENST00000470076 ECI2O75521 394 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 SEC24AO95486 1093 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 CYP3A5P20815 502 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 MARCKSP29966 332 aaPredicted RBP19.05■□□□□ 0.64
COL7A1-208ENST00000470076 LRPAP1P30533 357 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 LIG4P49917 911 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 PPP2R3AQ06190 1150 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 SNW1Q13573 536 aaKnown RBP19.05■□□□□ 0.64
COL7A1-208ENST00000470076 MLF2Q15773 248 aaPredicted RBP19.05■□□□□ 0.64
COL7A1-208ENST00000470076 SLC44A4Q53GD3 710 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 BRAPQ7Z569 592 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 MCRS1Q96EZ8 462 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 DDX23Q9BUQ8 820 aaKnown RBP19.05■□□□□ 0.64
COL7A1-208ENST00000470076 FOXQ1Q9C009 403 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 HAPLN2Q9GZV7 340 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 AFF4Q9UHB7 1163 aaKnown RBP19.05■□□□□ 0.64
COL7A1-208ENST00000470076 UBQLN1Q9UMX0 589 aaKnown RBP19.05■□□□□ 0.64
COL7A1-208ENST00000470076 CACNA1IQ9P0X4 2223 aa19.05■□□□□ 0.64
COL7A1-208ENST00000470076 EP300Q09472 2414 aaPredicted RBP19.04■□□□□ 0.64
COL7A1-208ENST00000470076 KANSL1LA0AUZ9 987 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 M0QZQ0 153 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 ZNF197O14709 1029 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 XPOTO43592 962 aaKnown RBP19.04■□□□□ 0.64
COL7A1-208ENST00000470076 MICAL2O94851 1124 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 FAM13AO94988 1023 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 PIGRP01833 764 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 CEBPBP17676 345 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 LONP1P36776 959 aaKnown RBP19.04■□□□□ 0.64
COL7A1-208ENST00000470076 ZNF131P52739 623 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 ZBTB6Q15916 424 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 C1orf210Q8IVY1 113 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 ELMOD1Q8N336 334 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 MYCT1Q8N699 235 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 KIF12Q96FN5 646 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 TSPAN18Q96SJ8 248 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 CORO1BQ9BR76 489 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 OXCT2Q9BYC2 517 aaPredicted RBP19.04■□□□□ 0.64
COL7A1-208ENST00000470076 PARVGQ9HBI0 331 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 TBX20Q9UMR3 447 aa19.04■□□□□ 0.64
COL7A1-208ENST00000470076 K7ENM7 598 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 OGTO15294 1046 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 CPB1P15086 417 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 ABCD1P33897 745 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 YWHAHQ04917 246 aaPredicted RBP19.03■□□□□ 0.64
COL7A1-208ENST00000470076 SPAG1Q07617 926 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 ADCY1Q08828 1119 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 DHX8Q14562 1220 aaKnown RBP19.03■□□□□ 0.64
COL7A1-208ENST00000470076 PRSS36Q5K4E3 855 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 CYP4A22Q5TCH4 519 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 IQCEQ6IPM2 695 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 PDZD4Q76G19 769 aaPredicted RBP19.03■□□□□ 0.64
COL7A1-208ENST00000470076 RASSF8Q8NHQ8 419 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 ELSPBP1Q96BH3 223 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 OSBPL6Q9BZF3 934 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 BLOC1S4Q9NUP1 217 aa19.03■□□□□ 0.64
COL7A1-208ENST00000470076 FANCMQ8IYD8 2048 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 TRAK2O60296 914 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 FAM189A1O60320 539 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 OAZ2O95190 189 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 KRT18P05783 430 aaKnown RBP19.02■□□□□ 0.64
COL7A1-208ENST00000470076 ADRB2P07550 413 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 GLULP15104 373 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 PLCG1P19174 1290 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 TNFSF9P41273 254 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 AARSP49588 968 aaKnown RBP eCLIP19.02■□□□□ 0.64
COL7A1-208ENST00000470076 ZC3H14Q6PJT7 736 aaKnown RBP19.02■□□□□ 0.64
COL7A1-208ENST00000470076 ADSSL1Q8N142 457 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 LEMD2Q8NC56 503 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 LRRC15Q8TF66 581 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 RAD54LQ92698 747 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 ZNF512Q96ME7 567 aaPredicted RBP19.02■□□□□ 0.64
COL7A1-208ENST00000470076 BCO2Q9BYV7 579 aa19.02■□□□□ 0.64
COL7A1-208ENST00000470076 RPF1Q9H9Y2 349 aaKnown RBP19.02■□□□□ 0.64
COL7A1-208ENST00000470076 LACTBL1A8MY62 500 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 LRRN2O75325 713 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 TBCAO75347 108 aaKnown RBP19.01■□□□□ 0.63
COL7A1-208ENST00000470076 MCM6Q14566 821 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 UBXN2BQ14CS0 331 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 KARSQ15046 597 aaKnown RBP19.01■□□□□ 0.63
COL7A1-208ENST00000470076 SF3A1Q15459 793 aaKnown RBP19.01■□□□□ 0.63
COL7A1-208ENST00000470076 ENOX2Q16206 610 aaKnown RBP19.01■□□□□ 0.63
COL7A1-208ENST00000470076 TANGO2Q6ICL3 276 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 POTEHQ6S545 545 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 RNF19BQ6ZMZ0 732 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 USP37Q86T82 979 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms