RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 O00370 1275 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 PSAPP07602 524 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 RIPK1Q13546 671 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 MPP2Q14168 576 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 WDR44Q5JSH3 913 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 HIBCHQ6NVY1 386 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 LLGL2Q6P1M3 1020 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 DRICH1Q6PGQ1 229 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 CRELD2Q6UXH1 353 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 FAM84AQ96KN4 292 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 OSBPL8Q9BZF1 889 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 CCDC113Q9H0I3 377 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 APOBEC3GQ9HC16 384 aaKnown RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 MRPL47Q9HD33 250 aaKnown RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 CTNNAL1Q9UBT7 734 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 PRKAG3Q9UGI9 489 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 RIPK3Q9Y572 518 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 THAP12O43422 761 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 ATP2C2O75185 946 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 CDH16O75309 829 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 GJB6O95452 261 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 ADCY8P40145 1251 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 MKRN3Q13064 507 aaKnown RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 CUL2Q13617 745 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 STAT4Q14765 748 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 CCDC142Q17RM4 750 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 LIN9Q5TKA1 542 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 ABHD15Q6UXT9 468 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 ANKS1BQ7Z6G8 1248 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 IFT74Q96LB3 600 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 SCLT1Q96NL6 688 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 POLR3FQ9H1D9 316 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 RPAP3Q9H6T3 665 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-209ENST00000470026 RNF146Q9NTX7 359 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 ABCF3Q9NUQ8 709 aa14.51□□□□□ -0.09
BRCA1-209ENST00000470026 PTPRJQ12913 1337 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 TCP11X1B4DZS4 312 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 CFHP08603 1231 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 CETPP11597 493 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 PRKCEQ02156 737 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 LRRC14Q15048 493 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 TRIP13Q15645 432 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-209ENST00000470026 SWSAP1Q6NVH7 229 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 CCDC60Q8IWA6 550 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-209ENST00000470026 CYP4X1Q8N118 509 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 RIBC1Q8N443 379 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-209ENST00000470026 FGFR1OP2Q9NVK5 253 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 SCINQ9Y6U3 715 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 LIG4P49917 911 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 NLRP11P59045 1033 aaKnown RBP14.5□□□□□ -0.09
BRCA1-209ENST00000470026 CXCL9Q07325 125 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 TMEM63BQ5T3F8 832 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 CEP128Q6ZU80 1094 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 ZCCHC9Q8N567 271 aaKnown RBP14.5□□□□□ -0.09
BRCA1-209ENST00000470026 UBR7Q8N806 425 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 GBP7Q8N8V2 638 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-209ENST00000470026 CCDC63Q8NA47 563 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 MAML1Q92585 1016 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 ATG4CQ96DT6 458 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 BICD1Q96G01 975 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 WNK4Q96J92 1243 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 PWWP2AQ96N64 755 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 FNBP1Q96RU3 617 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 PLCD4Q9BRC7 762 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 C11orf70Q9BRQ4 267 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 HAPLN2Q9GZV7 340 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 JPH1Q9HDC5 661 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-209ENST00000470026 MYOZ2Q9NPC6 264 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 ADAM22Q9P0K1 906 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 ADAMTS5Q9UNA0 930 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 AGAP1Q9UPQ3 857 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 NAALADL1Q9UQQ1 740 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 TELO2Q9Y4R8 837 aa14.5□□□□□ -0.09
BRCA1-209ENST00000470026 DOCK5Q9H7D0 1870 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 COL11A1P12107 1806 aaPredicted RBP14.49□□□□□ -0.09
BRCA1-209ENST00000470026 SUN1O94901 812 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 CLTAP09496 248 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 BRAFP15056 766 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 PIK3CAP42336 1068 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 ZNF132P52740 706 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 OAZ1P54368 228 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 BNIP1Q12981 228 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 MTMR2Q13614 643 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 ZNF268Q14587 947 aaPredicted RBP14.49□□□□□ -0.09
BRCA1-209ENST00000470026 C2CD6Q53TS8 623 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 XKR3Q5GH77 459 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 IZUMO3Q5VZ72 239 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 SPOPLQ6IQ16 392 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 ZNF365Q70YC5 407 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 PHLDB2Q86SQ0 1253 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 NSUN6Q8TEA1 469 aaKnown RBP14.49□□□□□ -0.09
BRCA1-209ENST00000470026 DYDC1Q8WWB3 177 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 CDHR1Q96JP9 859 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 MAGEB18Q96M61 343 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 HEMGNQ9BXL5 484 aa14.49□□□□□ -0.09
BRCA1-209ENST00000470026 GEMIN8Q9NWZ8 242 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms