RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 GCNT4Q9P109 453 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 PRKAG3Q9UGI9 489 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 AJAP1Q9UKB5 411 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 TBX21Q9UL17 535 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 MROH7Q68CQ1 1323 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 LCTP09848 1927 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 CYP3A7-CYP3A51PA0A087WV96 503 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 E7ENQ6 273 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 RAD21O60216 631 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 DIAPH2O60879 1101 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 NR3C1P04150 777 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 BMP3P12645 472 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 CCNB1P14635 433 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 CYP3A7P24462 503 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 HOXD13P35453 343 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 MSH2P43246 934 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 RPL21P46778 160 aaKnown RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 CDK7P50613 346 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 CCNHP51946 323 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 GJA9P57773 515 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 FAAP100Q0VG06 881 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 PRPF4BQ13523 1007 aaKnown RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 ACVR2BQ13705 512 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 TKFCQ3LXA3 575 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 CMPK2Q5EBM0 449 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 SLFN13Q68D06 897 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 NAIF1Q69YI7 327 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 MIS18BP1Q6P0N0 1132 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 MOXD1Q6UVY6 613 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 FAM160B2Q86V87 743 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 APLFQ8IW19 511 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 UBL4BQ8N7F7 174 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 PRELID2Q8N945 189 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 SYT2Q8N9I0 419 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 PCSK9Q8NBP7 692 aaKnown RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 ZNF483Q8TF39 744 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 LENG1Q96BZ8 264 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 GRAMD1AQ96CP6 724 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 SAAL1Q96ER3 474 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 MBOAT7Q96N66 472 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 RPS6KC1Q96S38 1066 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 TRIM7Q9C029 511 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 RAVER2Q9HCJ3 691 aaKnown RBP10.23□□□□□ -0.77
HDAC3-205ENST00000469550 STARD7Q9NQZ5 370 aa10.23□□□□□ -0.77
HDAC3-205ENST00000469550 POTEB3A0JP26 581 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 A6NHS1 94 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 ABLIM1O14639 778 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 KRT16P08779 473 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 ATP2A2P16615 1042 aaKnown RBP10.22□□□□□ -0.77
HDAC3-205ENST00000469550 GCKP35557 465 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 CASP5P51878 434 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 ATP11AP98196 1134 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 FPGSQ05932 587 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 DCAF17Q5H9S7 520 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-205ENST00000469550 RNF43Q68DV7 783 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 POTEBQ6S5H4 581 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 SPATA21Q7Z572 469 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 GLYCTKQ8IVS8 523 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDAC3-205ENST00000469550 SLFN12Q8IYM2 578 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 KIRREL3Q8IZU9 778 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 EPS8L3Q8TE67 593 aaKnown RBP10.22□□□□□ -0.77
HDAC3-205ENST00000469550 CKAP2Q8WWK9 683 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 ALG3Q92685 438 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 CDX2Q99626 313 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-205ENST00000469550 MKNK1Q9BUB5 465 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 SPATS2LQ9NUQ6 558 aaKnown RBP10.22□□□□□ -0.77
HDAC3-205ENST00000469550 CTDP1Q9Y5B0 961 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-205ENST00000469550 FRMPD4Q14CM0 1322 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 COL6A3P12111 3177 aa10.22□□□□□ -0.77
HDAC3-205ENST00000469550 DNAH12Q6ZR08 3092 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 TCP11X1B4DZS4 312 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ADCY6O43306 1168 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 PQBP1O60828 265 aaKnown RBP10.21□□□□□ -0.77
HDAC3-205ENST00000469550 TCEA3O75764 348 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ATP5HO75947 161 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 RAG1P15918 1043 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 RFX1P22670 979 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 IFNAR2P48551 515 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-205ENST00000469550 KCNA10Q16322 511 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 PARP6Q2NL67 630 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ANKRD20A2Q5SQ80 823 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ANKRD20A1Q5TYW2 823 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ANKRD20A3Q5VUR7 823 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ARMCX2Q7L311 632 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 CPXCR1Q8N123 301 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 LRRC47Q8N1G4 583 aaKnown RBP10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ANKRD35Q8N283 1001 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 CHURC1Q8WUH1 139 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 VTI1AQ96AJ9 217 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 RAB3IPQ96QF0 476 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-205ENST00000469550 TTYH1Q9H313 450 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ACAD9Q9H845 621 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 SLC24A3Q9HC58 644 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 TMEM39AQ9NV64 488 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ADAM22Q9P0K1 906 aa10.21□□□□□ -0.77
HDAC3-205ENST00000469550 ALG6Q9Y672 507 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms