RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MPZL3Q6UWV2 235 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 DTHD1Q6ZMT9 781 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 APBB1IPQ7Z5R6 666 aaPredicted RBP13.41□□□□□ -0.26
HDAC3-204ENST00000469207 TCEAL8Q8IYN2 117 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 DDX12PQ92771 950 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 SUSD3Q96L08 255 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 AVENQ9NQS1 362 aaPredicted RBP13.41□□□□□ -0.26
HDAC3-204ENST00000469207 SLC38A7Q9NVC3 462 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 ANKFY1Q9P2R3 1169 aa13.41□□□□□ -0.26
HDAC3-204ENST00000469207 NCANO14594 1321 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 H7C4K7 107 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 SYN3O14994 580 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 VNN2O95498 520 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 RPL9P32969 192 aaKnown RBP13.4□□□□□ -0.26
HDAC3-204ENST00000469207 TNFSF9P41273 254 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 TWF1Q12792 350 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 MTAPQ13126 283 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 ZNF852Q6ZMS4 543 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 PDZD4Q76G19 769 aaPredicted RBP13.4□□□□□ -0.26
HDAC3-204ENST00000469207 TMEM161BQ8NDZ6 487 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 CLDN23Q96B33 292 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 ELSPBP1Q96BH3 223 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
HDAC3-204ENST00000469207 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 ASB16Q96NS5 453 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 PGLYRP2Q96PD5 576 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 NTPCRQ9BSD7 190 aaKnown RBP13.4□□□□□ -0.26
HDAC3-204ENST00000469207 OSBPL6Q9BZF3 934 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 CRISPLD1Q9H336 500 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 BRD9Q9H8M2 597 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 ZFP14Q9HCL3 533 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.4□□□□□ -0.26
HDAC3-204ENST00000469207 FBXO4Q9UKT5 387 aa13.4□□□□□ -0.26
HDAC3-204ENST00000469207 RBM19Q9Y4C8 960 aaKnown RBP13.4□□□□□ -0.26
HDAC3-204ENST00000469207 GPR179Q6PRD1 2367 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 TOM1L1O75674 476 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 CXCL8P10145 99 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 GDI1P31150 447 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 TEAD2Q15562 447 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 RSPO4Q2I0M5 234 aaPredicted RBP13.39□□□□□ -0.27
HDAC3-204ENST00000469207 ZNF528Q3MIS6 628 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 ARSHQ5FYA8 562 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 CYP4A22Q5TCH4 519 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 VITQ6UXI7 678 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 DGLUCYQ7Z3D6 616 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 ZNF687Q8N1G0 1237 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 ATRIPQ8WXE1 791 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 RSPRY1Q96DX4 576 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 ZNF512Q96ME7 567 aaPredicted RBP13.39□□□□□ -0.27
HDAC3-204ENST00000469207 TRMT61BQ9BVS5 477 aaKnown RBP13.39□□□□□ -0.27
HDAC3-204ENST00000469207 ZNF334Q9HCZ1 680 aaPredicted RBP13.39□□□□□ -0.27
HDAC3-204ENST00000469207 SLC27A5Q9Y2P5 690 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 OTOGLQ3ZCN5 2332 aa13.39□□□□□ -0.27
HDAC3-204ENST00000469207 LACTBL1A8MY62 500 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 PPEF2O14830 753 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 MAPTP10636 758 aaKnown RBP13.38□□□□□ -0.27
HDAC3-204ENST00000469207 PLS3P13797 630 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 CPB1P15086 417 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 GUCY2CP25092 1073 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-204ENST00000469207 HOXC13P31276 330 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC3-204ENST00000469207 SLC12A3P55017 1021 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 STRN3Q13033 797 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 NOLC1Q14978 699 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC3-204ENST00000469207 STXBP5Q5T5C0 1151 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 TPGS2Q68CL5 300 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 IQCEQ6IPM2 695 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 ZNF280DQ6N043 979 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 MAP4K3Q8IVH8 894 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 SYT2Q8N9I0 419 aaPredicted RBP13.38□□□□□ -0.27
HDAC3-204ENST00000469207 ZBTB44Q8NCP5 570 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 LRRC15Q8TF66 581 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 SPIRE2Q8WWL2 714 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 TMEM209Q96SK2 561 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 NELL2Q99435 816 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 RAB34Q9BZG1 259 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 LMAN1LQ9HAT1 526 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 ZSCAN32Q9NX65 697 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 AFF4Q9UHB7 1163 aaKnown RBP13.38□□□□□ -0.27
HDAC3-204ENST00000469207 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
HDAC3-204ENST00000469207 PATJQ8NI35 1801 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 TTC26A0AVF1 554 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 VWA3AA6NCI4 1184 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 ZNF197O14709 1029 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 NCAM2O15394 837 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 CLDN3O15551 220 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 SOAT2O75908 522 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 PLA2G4BP0C869 781 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 PSMC3P17980 439 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 PRPHP41219 470 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 MCL1Q07820 350 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 DUSP4Q13115 394 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 DHX8Q14562 1220 aaKnown RBP13.37□□□□□ -0.27
HDAC3-204ENST00000469207 ZBTB6Q15916 424 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 LPAL2Q16609 132 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 TTC9BQ8N6N2 239 aa13.37□□□□□ -0.27
HDAC3-204ENST00000469207 APPL2Q8NEU8 664 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms