RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SPOPLQ6IQ16 392 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 SLFN11Q7Z7L1 901 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 DAAM2Q86T65 1068 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 RSPH3Q86UC2 560 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 EFCAB13Q8IY85 973 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 UBR7Q8N806 425 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 CEP120Q8N960 986 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 LRRC57Q8N9N7 239 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 MSANTD4Q8NCY6 345 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 LRRN4CLQ8ND94 238 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 TRIB2Q92519 343 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 LENG1Q96BZ8 264 aaPredicted RBP10□□□□□ -0.81
SMC1A-205ENST00000469129 ZNF653Q96CK0 615 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 CPB2Q96IY4 423 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 CAPZA3Q96KX2 299 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 SELENOOQ9BVL4 669 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 ADAMTS10Q9H324 1103 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 PLEKHA5Q9HAU0 1116 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 APOBEC3GQ9HC16 384 aaKnown RBP10□□□□□ -0.81
SMC1A-205ENST00000469129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10□□□□□ -0.81
SMC1A-205ENST00000469129 CTTNBP2NLQ9P2B4 639 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 UVRAGQ9P2Y5 699 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 AMFRQ9UKV5 643 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 NUB1Q9Y5A7 615 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 MIF4GDA9UHW6 222 aaKnown RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 GPR25O00155 361 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 XPOTO43592 962 aaKnown RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 NCK2O43639 380 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 GPR32O75388 356 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 NPTXRO95502 500 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 LSM8O95777 96 aaKnown RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 STAU1O95793 577 aaKnown RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 FTLP02792 175 aaPredicted RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 CYP1A2P05177 515 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 IQCF3P0C7M6 154 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 ACO1P21399 889 aaKnown RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 NSFP46459 744 aaKnown RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 FLT3LGP49771 235 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 ZNF132P52740 706 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 MYL6P60660 151 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 BEX3Q00994 111 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 SP3Q02447 781 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 CENPCQ03188 943 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 LIN9Q5TKA1 542 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 JADE1Q6IE81 842 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 ACAD10Q6JQN1 1059 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 TMEM270Q6UE05 265 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 PALB2Q86YC2 1186 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 SLC35G2Q8TBE7 412 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 DDX1Q92499 740 aaKnown RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 OSMRQ99650 979 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 ARID3AQ99856 593 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 TRIM6Q9C030 488 aaPredicted RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 THAP2Q9H0W7 228 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 VRTNQ9H8Y1 702 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 AVENQ9NQS1 362 aaPredicted RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 LCMT1Q9UIC8 334 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 CEP83Q9Y592 693 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.99□□□□□ -0.81
SMC1A-205ENST00000469129 SCINQ9Y6U3 715 aa9.99□□□□□ -0.81
SMC1A-205ENST00000469129 TARSL2A2RTX5 802 aaKnown RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 CCDC151A5D8V7 595 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 LACTBL1A8MY62 500 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 THAP12O43422 761 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 MED7O43513 233 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 SRGAP2O75044 1071 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 GNRH1P01148 92 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 CYP1A1P04798 512 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 NFICP08651 508 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 KRT19P08727 400 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 H2AFXP16104 143 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 EIF4BP23588 611 aaKnown RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 CST5P28325 142 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 CTGFP29279 349 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 CRYBB1P53674 252 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 RBM10P98175 930 aaKnown RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 PRKCZQ05513 592 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 NAA30Q147X3 362 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 SNX17Q15036 470 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 BRD3Q15059 726 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 FBXO38Q6PIJ6 1188 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 TMCO3Q6UWJ1 677 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 RUFY4Q6ZNE9 571 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 CDR2LQ86X02 465 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 CREG2Q8IUH2 290 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 MMGT1Q8N4V1 131 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 UBL4BQ8N7F7 174 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 TRPV1Q8NER1 839 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 ZNF564Q8TBZ8 553 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 DNAJB3Q8WWF6 145 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 ARHGEF26Q96DR7 871 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 VCPIP1Q96JH7 1222 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 FAM84AQ96KN4 292 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 SNX27Q96L92 541 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 MMS19Q96T76 1030 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 PCDHB18PQ96TA0 734 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 NAP1L3Q99457 506 aaPredicted RBP9.98□□□□□ -0.81
SMC1A-205ENST00000469129 DNAI2Q9GZS0 605 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 CYP3A43Q9HB55 503 aa9.98□□□□□ -0.81
SMC1A-205ENST00000469129 TAS2R14Q9NYV8 317 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms