RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 UNC13DQ70J99 1090 aa13.66□□□□□ -0.22
ABCF1-204ENST00000468958 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
ABCF1-204ENST00000468958 UROC1Q96N76 676 aa13.66□□□□□ -0.22
ABCF1-204ENST00000468958 MRPL44Q9H9J2 332 aaKnown RBP13.66□□□□□ -0.22
ABCF1-204ENST00000468958 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.66□□□□□ -0.22
ABCF1-204ENST00000468958 SERTAD1Q9UHV2 236 aa13.66□□□□□ -0.22
ABCF1-204ENST00000468958 FBXW11Q9UKB1 542 aa13.66□□□□□ -0.22
ABCF1-204ENST00000468958 CPSF3Q9UKF6 684 aaKnown RBP13.66□□□□□ -0.22
ABCF1-204ENST00000468958 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
ABCF1-204ENST00000468958 UBE4BO95155 1302 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 OGTO15294 1046 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 KIF20AO95235 890 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 ASGR2P07307 311 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 CLTAP09496 248 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 ALADP13716 330 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 CASP1P29466 404 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 ADSSP30520 456 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
ABCF1-204ENST00000468958 KYAT1Q16773 422 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 ATAT1Q5SQI0 421 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 CRELD2Q6UXH1 353 aaPredicted RBP13.65□□□□□ -0.22
ABCF1-204ENST00000468958 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
ABCF1-204ENST00000468958 FMR1NBQ8N0W7 255 aaPredicted RBP13.65□□□□□ -0.22
ABCF1-204ENST00000468958 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 CMASQ8NFW8 434 aaPredicted RBP13.65□□□□□ -0.22
ABCF1-204ENST00000468958 PAGE5Q96GU1 130 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 RIPOR3Q96MK2 946 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 NECTIN4Q96NY8 510 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 EXOC1Q9NV70 894 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 RMND1Q9NWS8 449 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 MTRRQ9UBK8 725 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 STYXL1Q9Y6J8 313 aa13.65□□□□□ -0.22
ABCF1-204ENST00000468958 TBC1D4O60343 1298 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 SMC2O95347 1197 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 OR1D2P34982 312 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 AFMP43652 599 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 ACOT2P49753 483 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 ZXDAP98168 799 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 PSMD2Q13200 908 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 SCARA3Q6AZY7 606 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 C15orf39Q6ZRI6 1047 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 EDAQ92838 391 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 MSTO1Q9BUK6 570 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 TMEM206Q9H813 350 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 SLC38A7Q9NVC3 462 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 CDY1Q9Y6F8 540 aa13.64□□□□□ -0.23
ABCF1-204ENST00000468958 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 PRR33A8MZF0 331 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
ABCF1-204ENST00000468958 GCNT3O95395 438 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 NFICP08651 508 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 PTMSP20962 102 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 LRPAP1P30533 357 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 HOXD13P35453 343 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
ABCF1-204ENST00000468958 RAB33AQ14088 237 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 MRPL58Q14197 206 aaKnown RBP13.63□□□□□ -0.23
ABCF1-204ENST00000468958 POSTNQ15063 836 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 PTPN21Q16825 1174 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 FAM26FQ5R3K3 315 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
ABCF1-204ENST00000468958 JADE1Q6IE81 842 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 HFE2Q6ZVN8 426 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 HDAC7Q8WUI4 952 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 FAM84AQ96KN4 292 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 SUSD3Q96L08 255 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 ACCSQ96QU6 501 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 PLEKHA4Q9H4M7 779 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 PLEKHA5Q9HAU0 1116 aa13.63□□□□□ -0.23
ABCF1-204ENST00000468958 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.63□□□□□ -0.23
ABCF1-204ENST00000468958 WDR27A2RRH5 827 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 PRPF40AO75400 957 aaKnown RBP13.62□□□□□ -0.23
ABCF1-204ENST00000468958 ZMYND10O75800 440 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 PRPF6O94906 941 aaKnown RBP13.62□□□□□ -0.23
ABCF1-204ENST00000468958 C1RP00736 705 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 RPL9P32969 192 aaKnown RBP13.62□□□□□ -0.23
ABCF1-204ENST00000468958 NTHL1P78549 312 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 ROR1Q01973 937 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 PPP2R3AQ06190 1150 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 L1TD1Q5T7N2 865 aaKnown RBP13.62□□□□□ -0.23
ABCF1-204ENST00000468958 SLFN12LQ6IEE8 588 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 CCDC149Q6ZUS6 474 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 EFCAB13Q8IY85 973 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 ZDHHC14Q8IZN3 488 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 TDRD5Q8NAT2 981 aaKnown RBP13.62□□□□□ -0.23
ABCF1-204ENST00000468958 SMG7Q92540 1137 aaKnown RBP13.62□□□□□ -0.23
ABCF1-204ENST00000468958 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 ASIC4Q96FT7 647 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 MYADMQ96S97 322 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 RHOBTB2Q9BYZ6 727 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 PRKD2Q9BZL6 878 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
ABCF1-204ENST00000468958 WDR6Q9NNW5 1121 aaKnown RBP13.62□□□□□ -0.23
ABCF1-204ENST00000468958 LIMD1Q9UGP4 676 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 USTQ9Y2C2 406 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 NR2E1Q9Y466 385 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 BACE2Q9Y5Z0 518 aa13.62□□□□□ -0.23
ABCF1-204ENST00000468958 ZNF318Q5VUA4 2279 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms