RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ANKRD63C9JTQ0 380 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 B3GAT3O94766 335 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 EPCAMP16422 314 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 RPL9P32969 192 aaKnown RBP12.15□□□□□ -0.46
COL4A6-205ENST00000468338 ME1P48163 572 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 CLCNKBP51801 687 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 EHHADHQ08426 723 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 ELAVL2Q12926 359 aaKnown RBP12.15□□□□□ -0.46
COL4A6-205ENST00000468338 ENOX2Q16206 610 aaKnown RBP12.15□□□□□ -0.46
COL4A6-205ENST00000468338 SEZ6Q53EL9 994 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-205ENST00000468338 RTP2Q5QGT7 225 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 ADALQ6DHV7 355 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 LLGL2Q6P1M3 1020 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 LILRA6Q6PI73 481 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 C3orf58Q8NDZ4 430 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 LEO1Q8WVC0 666 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-205ENST00000468338 PIK3R5Q8WYR1 880 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 BICD1Q96G01 975 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 TSPAN18Q96SJ8 248 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 LRRC27Q9C0I9 530 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 ADAM7Q9H2U9 754 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 VRTNQ9H8Y1 702 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 MRPL44Q9H9J2 332 aaKnown RBP12.15□□□□□ -0.46
COL4A6-205ENST00000468338 MAGEF1Q9HAY2 307 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 GOLGA2P5Q9HBQ8 144 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 PANK4Q9NVE7 773 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 DZANK1Q9NVP4 752 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 FKBPLQ9UIM3 349 aa12.15□□□□□ -0.46
COL4A6-205ENST00000468338 CPSF3Q9UKF6 684 aaKnown RBP12.15□□□□□ -0.46
COL4A6-205ENST00000468338 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-205ENST00000468338 ANK1P16157 1881 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 C5orf42Q9H799 3197 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 FAM237AA0A1B0GTK4 181 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 GOLGA8CPA6NN73 597 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 TISP43B9A030 160 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
COL4A6-205ENST00000468338 ADH1AP07327 375 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 CXCL8P10145 99 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 HARSP12081 509 aaKnown RBP12.14□□□□□ -0.47
COL4A6-205ENST00000468338 IDEP14735 1019 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 FGFR3P22607 806 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 CMA1P23946 247 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 KLRC2P26717 231 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 ADSSP30520 456 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 LRPAP1P30533 357 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 TNFSF9P41273 254 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 CASP5P51878 434 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 KRT85P78386 507 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 AMPD3Q01432 767 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 ITIH3Q06033 890 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 ALCAMQ13740 583 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 BECN1Q14457 450 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 CBX2Q14781 532 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-205ENST00000468338 ZBTB41Q5SVQ8 909 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
COL4A6-205ENST00000468338 FAM171A1Q5VUB5 890 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 SLFN12LQ6IEE8 588 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 KIAA1841Q6NSI8 718 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-205ENST00000468338 LNX1Q8TBB1 728 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-205ENST00000468338 HDAC7Q8WUI4 952 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 STAMQ92783 540 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 C18orf25Q96B23 403 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-205ENST00000468338 DHX58Q96C10 678 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 CHAMP1Q96JM3 812 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 FBXL18Q96ME1 805 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 TTPALQ9BTX7 342 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 PHF7Q9BWX1 381 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-205ENST00000468338 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 RHOBTB2Q9BYZ6 727 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 FAM13BQ9NYF5 915 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 HPSEQ9Y251 543 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 ATP6V1DQ9Y5K8 247 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 PLXNA3P51805 1871 aa12.14□□□□□ -0.47
COL4A6-205ENST00000468338 LOC730098B7Z3J9 87 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 C2CD2LO14523 706 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 CYP3A5P20815 502 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 CA8P35219 290 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 CREMQ03060 361 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 POSTNQ15063 836 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 BRICD5Q6PL45 260 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 BLOC1S3Q6QNY0 202 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 CRELD2Q6UXH1 353 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-205ENST00000468338 RNF19BQ6ZMZ0 732 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 CD302Q8IX05 232 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 CCDC65Q8IXS2 484 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 TMEM87AQ8NBN3 555 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 ANKK1Q8NFD2 765 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 CMASQ8NFW8 434 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-205ENST00000468338 HASPINQ8TF76 798 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 RIN2Q8WYP3 895 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-205ENST00000468338 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
COL4A6-205ENST00000468338 CLSTN3Q9BQT9 956 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 PYM1Q9BRP8 204 aaKnown RBP12.13□□□□□ -0.47
COL4A6-205ENST00000468338 MSTO1Q9BUK6 570 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 IKZF4Q9H2S9 585 aa12.13□□□□□ -0.47
COL4A6-205ENST00000468338 TBC1D7Q9P0N9 293 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms