RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 EFCAB13Q8IY85 973 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 APPL2Q8NEU8 664 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 HDAC7Q8WUI4 952 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 PDE11AQ9HCR9 933 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 DPP7Q9UHL4 492 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 BACE2Q9Y5Z0 518 aa21.67■■□□□ 1.06
NPHP4-206ENST00000468253 TDRD15B5MCY1 1934 aaKnown RBP21.67■■□□□ 1.06
NPHP4-206ENST00000468253 M0QZQ0 153 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 EXOC3O60645 756 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 GLP2RO95838 553 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 RPL13P26373 211 aaKnown RBP21.66■■□□□ 1.06
NPHP4-206ENST00000468253 BRCC3P46736 316 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 NDUFV1P49821 464 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 TFF2Q03403 129 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 DLX2Q07687 328 aaPredicted RBP21.66■■□□□ 1.06
NPHP4-206ENST00000468253 MRPL58Q14197 206 aaKnown RBP21.66■■□□□ 1.06
NPHP4-206ENST00000468253 PSMD6Q15008 389 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 CEP57Q86XR8 500 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 VN1R2Q8NFZ6 395 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 INTS13Q9NVM9 706 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 PCDHB8Q9UN66 801 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 HCFC2Q9Y5Z7 792 aa21.66■■□□□ 1.06
NPHP4-206ENST00000468253 ARHGEF37A1IGU5 675 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 MAPK13O15264 365 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 NR3C1P04150 777 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 BMP1P13497 986 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 PPP1R2P41236 205 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 CLCN4P51793 760 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 GUCY2FP51841 1108 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 WNT7BP56706 349 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 TFAMQ00059 246 aaKnown RBP21.65■■□□□ 1.06
NPHP4-206ENST00000468253 CYP24A1Q07973 514 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 TJAP1Q5JTD0 557 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 CENPPQ6IPU0 288 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 LILRA6Q6PI73 481 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 EP400NLQ6ZTU2 488 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 RDH13Q8NBN7 331 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.65■■□□□ 1.06
NPHP4-206ENST00000468253 B3GALT6Q96L58 329 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 CLSTN3Q9BQT9 956 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 OXCT2Q9BYC2 517 aaPredicted RBP21.65■■□□□ 1.06
NPHP4-206ENST00000468253 LMBRD1Q9NUN5 540 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 DZANK1Q9NVP4 752 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 ITGA11Q9UKX5 1188 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 FAM50BQ9Y247 325 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 CITO14578 2027 aa21.65■■□□□ 1.06
NPHP4-206ENST00000468253 H7C4K7 107 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 TBX10O75333 385 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 MCM4P33991 863 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 PNPLA4P41247 253 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 PRCPP42785 496 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 MCCD1P59942 119 aaPredicted RBP21.64■■□□□ 1.05
NPHP4-206ENST00000468253 PSMD5Q16401 504 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 EDRF1Q3B7T1 1238 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 ANKRD54Q6NXT1 300 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 WDR49Q8IV35 697 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 NOC3LQ8WTT2 800 aaKnown RBP21.64■■□□□ 1.05
NPHP4-206ENST00000468253 ANKRD36BP1Q96IX9 119 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 FNBP1Q96RU3 617 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 MTRRQ9UBK8 725 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 CD207Q9UJ71 328 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 MAPK8IP1Q9UQF2 711 aa21.64■■□□□ 1.05
NPHP4-206ENST00000468253 TRIP11Q15643 1979 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 GRXCR2A6NFK2 248 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 H3BQ06 376 aaPredicted RBP21.63■■□□□ 1.05
NPHP4-206ENST00000468253 TBC1D4O60343 1298 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 OAZ2O95190 189 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 TYMPP19971 482 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 TKTP29401 623 aaKnown RBP21.63■■□□□ 1.05
NPHP4-206ENST00000468253 AP3M2P53677 418 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 CLDN10P78369 228 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 RBP5P82980 135 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 ENPEPQ07075 957 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 RAB33AQ14088 237 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 ZCWPW2Q504Y3 356 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 ELMSAN1Q6PJG2 1045 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 PRSS55Q6UWB4 352 aaPredicted RBP21.63■■□□□ 1.05
NPHP4-206ENST00000468253 ADSSL1Q8N142 457 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 LRRC52Q8N7C0 313 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 C1orf127Q8N9H9 656 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 CXorf38Q8TB03 319 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 ERCC4Q92889 916 aaPredicted RBP21.63■■□□□ 1.05
NPHP4-206ENST00000468253 S1PR5Q9H228 398 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 PLEKHA4Q9H4M7 779 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 KIAA1468Q9P260 1216 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 MAN1B1Q9UKM7 699 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 FRMD4BQ9Y2L6 1034 aa21.63■■□□□ 1.05
NPHP4-206ENST00000468253 GOLGA6L22H0YM25 854 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 I3L4J1 428 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 TNNC2P02585 160 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 TAF6P49848 677 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 ADAM9Q13443 819 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 MORC3Q14149 939 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 VARS2Q5ST30 1063 aaKnown RBP21.62■■□□□ 1.05
NPHP4-206ENST00000468253 FOXR2Q6PJQ5 311 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 DSTYKQ6XUX3 929 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 RTL10Q7L3V2 364 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 CSGALNACT2Q8N6G5 542 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 TRIML1Q8N9V2 468 aa21.62■■□□□ 1.05
NPHP4-206ENST00000468253 SMRP1Q8NCR6 262 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms