RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MAML2Q8IZL2 1156 aaPredicted RBP18.85■□□□□ 0.61
TRIM56-203ENST00000467847 TMEM161BQ8NDZ6 487 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 APPL2Q8NEU8 664 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 TBC1D32Q96NH3 1257 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 PLIN2Q99541 437 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 PLA2G2FQ9BZM2 168 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 LTB4R2Q9NPC1 389 aa18.85■□□□□ 0.61
TRIM56-203ENST00000467847 ZNF197O14709 1029 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 CLDN3O15551 220 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 LAMTOR5O43504 91 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 MATR3P43243 847 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRIM56-203ENST00000467847 SLC10A6Q3KNW5 377 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 PRSS36Q5K4E3 855 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 HYIQ5T013 277 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 TANGO2Q6ICL3 276 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 ZNF280DQ6N043 979 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 POTEHQ6S545 545 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 ZPBP2Q6X784 338 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 PDZD4Q76G19 769 aaPredicted RBP18.84■□□□□ 0.61
TRIM56-203ENST00000467847 ELMOD1Q8N336 334 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 SYT2Q8N9I0 419 aaPredicted RBP18.84■□□□□ 0.61
TRIM56-203ENST00000467847 DDX12PQ92771 950 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 ELSPBP1Q96BH3 223 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 TCEAL4Q96EI5 215 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 CDK5RAP3Q96JB5 506 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 PNMA5Q96PV4 448 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 TUBGCP4Q9UGJ1 667 aa18.84■□□□□ 0.61
TRIM56-203ENST00000467847 VWA3AA6NCI4 1184 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 CXCL8P10145 99 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 MARCKSP29966 332 aaPredicted RBP18.83■□□□□ 0.6
TRIM56-203ENST00000467847 MAGEA9P43362 315 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 MCL1Q07820 350 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 ADCY1Q08828 1119 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 ZNF528Q3MIS6 628 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 ZBTB41Q5SVQ8 909 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 CYP4A22Q5TCH4 519 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 KCTD17Q8N5Z5 321 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 RUBCNQ92622 972 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 KCND2Q9NZV8 630 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 PCDHB8Q9UN66 801 aa18.83■□□□□ 0.6
TRIM56-203ENST00000467847 NPHP3-ACAD11A0A0J9YXS1 232 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 KINO60870 393 aaKnown RBP18.82■□□□□ 0.6
TRIM56-203ENST00000467847 MICAL2O94851 1124 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 PLA2G4BP0C869 781 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 CPB1P15086 417 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 FCARP24071 287 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 CCR2P41597 374 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 SLC12A3P55017 1021 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 CSTF1Q05048 431 aaKnown RBP18.82■□□□□ 0.6
TRIM56-203ENST00000467847 SPAG1Q07617 926 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 TWF1Q12792 350 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 FAM78AQ5JUQ0 283 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 IQCEQ6IPM2 695 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 ZNF852Q6ZMS4 543 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 BICD1Q96G01 975 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 NELL2Q99435 816 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 PLEKHA5Q9HAU0 1116 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 ZFP14Q9HCL3 533 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 HEBP1Q9NRV9 189 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 AFF4Q9UHB7 1163 aaKnown RBP18.82■□□□□ 0.6
TRIM56-203ENST00000467847 FBXO4Q9UKT5 387 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 MAFFQ9ULX9 164 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 F5P12259 2224 aa18.82■□□□□ 0.6
TRIM56-203ENST00000467847 CEP250Q9BV73 2442 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 GPR179Q6PRD1 2367 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 H0YCG3 227 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 NCAM2O15394 837 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 KRT37O76014 449 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 CLTAP09496 248 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 TARSP26639 723 aaKnown RBP18.81■□□□□ 0.6
TRIM56-203ENST00000467847 CACNB1Q02641 598 aaPredicted RBP18.81■□□□□ 0.6
TRIM56-203ENST00000467847 GRM2Q14416 872 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 TMEM130Q8N3G9 435 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 DNASE1L2Q92874 299 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 KIF12Q96FN5 646 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 ZNF512Q96ME7 567 aaPredicted RBP18.81■□□□□ 0.6
TRIM56-203ENST00000467847 CNTNAP3BQ96NU0 1288 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 CNTNAP3Q9BZ76 1288 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 HAPLN2Q9GZV7 340 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 BRD9Q9H8M2 597 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 CEP72Q9P209 647 aa18.81■□□□□ 0.6
TRIM56-203ENST00000467847 LARSQ9P2J5 1176 aaKnown RBP18.81■□□□□ 0.6
TRIM56-203ENST00000467847 MRPS17Q9Y2R5 130 aaKnown RBP18.81■□□□□ 0.6
TRIM56-203ENST00000467847 NCOR2Q9Y618 2525 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 H3BQV1 296 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 NCKAP1LP55160 1127 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 YWHAHQ04917 246 aaPredicted RBP18.8■□□□□ 0.6
TRIM56-203ENST00000467847 PPP2R3AQ06190 1150 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 RABEP1Q15276 862 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 C8orf34Q49A92 452 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 TMEM119Q4V9L6 283 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 ARL6IP4Q66PJ3 421 aaKnown RBP18.8■□□□□ 0.6
TRIM56-203ENST00000467847 RNF19BQ6ZMZ0 732 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 HS6ST3Q8IZP7 471 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 CLDN23Q96B33 292 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 ASB16Q96NS5 453 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 TRMT61BQ9BVS5 477 aaKnown RBP18.8■□□□□ 0.6
TRIM56-203ENST00000467847 ASAH2Q9NR71 780 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 TICRRQ7Z2Z1 1910 aa18.8■□□□□ 0.6
TRIM56-203ENST00000467847 TTC26A0AVF1 554 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms