RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 DMDP11532 3685 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 VNN2O95498 520 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 CFHP08603 1231 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 ATF2P15336 505 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 CYP3A5P20815 502 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 SFR1Q86XK3 245 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 TCEAL8Q8IYN2 117 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 GPR152Q8TDT2 470 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 DNAJC19Q96DA6 116 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 USP28Q96RU2 1077 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 AVENQ9NQS1 362 aaPredicted RBP13.03□□□□□ -0.32
PTPRF-211ENST00000467464 SLC2A4RGQ9NR83 387 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 STK17AQ9UEE5 414 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 UBQLN1Q9UMX0 589 aaKnown RBP13.03□□□□□ -0.32
PTPRF-211ENST00000467464 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 ZDBF2Q9HCK1 2354 aa13.03□□□□□ -0.32
PTPRF-211ENST00000467464 MYMKA6NI61 221 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 H0Y858 1186 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 H7C4K7 107 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
PTPRF-211ENST00000467464 TBCAO75347 108 aaKnown RBP13.02□□□□□ -0.33
PTPRF-211ENST00000467464 RHOP08100 348 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 ADSSP30520 456 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 MCM4P33991 863 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.33
PTPRF-211ENST00000467464 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 SLC39A14Q15043 492 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 KYAT1Q16773 422 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 CTXN3Q4LDR2 81 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 PABPC1LQ4VXU2 614 aaKnown RBP13.02□□□□□ -0.33
PTPRF-211ENST00000467464 PRSS36Q5K4E3 855 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 SPATA1Q5VX52 437 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 JADE1Q6IE81 842 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 ZNF280DQ6N043 979 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 CRELD2Q6UXH1 353 aaPredicted RBP13.02□□□□□ -0.33
PTPRF-211ENST00000467464 DYMQ7RTS9 669 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 ZNF720Q7Z2F6 126 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 FLCNQ8NFG4 579 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 MSTO1Q9BUK6 570 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 MFSD1Q9H3U5 465 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 POLIQ9UNA4 740 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 INSL5Q9Y5Q6 135 aa13.02□□□□□ -0.33
PTPRF-211ENST00000467464 FRMD3A2A2Y4 597 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 SPTLC1O15269 473 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 OAZ2O95190 189 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 KRT18P05783 430 aaKnown RBP13.01□□□□□ -0.33
PTPRF-211ENST00000467464 NFICP08651 508 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 CEBPBP17676 345 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 CCR2P41597 374 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 MATR3P43243 847 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPRF-211ENST00000467464 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
PTPRF-211ENST00000467464 KCNA1Q09470 495 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 TPGS2Q68CL5 300 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 CCDC105Q8IYK2 499 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 APPL2Q8NEU8 664 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 RASSF8Q8NHQ8 419 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 ING5Q8WYH8 240 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 FGFBP2Q9BYJ0 223 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 ZHX3Q9H4I2 956 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 RPF1Q9H9Y2 349 aaKnown RBP13.01□□□□□ -0.33
PTPRF-211ENST00000467464 DLGAP2Q9P1A6 1054 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 AFF4Q9UHB7 1163 aaKnown RBP13.01□□□□□ -0.33
PTPRF-211ENST00000467464 FBXL21Q9UKT6 434 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 CA14Q9ULX7 337 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
PTPRF-211ENST00000467464 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.01□□□□□ -0.33
PTPRF-211ENST00000467464 PIEZO1Q92508 2521 aa13.01□□□□□ -0.33
PTPRF-211ENST00000467464 DOCK8Q8NF50 2099 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 ANO9A1A5B4 782 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 PROB1E7EW31 1015 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 STX6O43752 255 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 MOSPD3O75425 235 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 FCARP24071 287 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 ABCD1P33897 745 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 CASP5P51878 434 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 ARPP19P56211 112 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 WNT7BP56706 349 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 GPC5P78333 572 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
PTPRF-211ENST00000467464 LINC00301Q8NCQ3 95 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 ZSWIM2Q8NEG5 633 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 HVCN1Q96D96 273 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 TCEAL4Q96EI5 215 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 TSPAN18Q96SJ8 248 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 CRISPLD1Q9H336 500 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 CYP4F11Q9HBI6 524 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 ARHGEF3Q9NR81 526 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 CEP72Q9P209 647 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 DERAQ9Y315 318 aa13□□□□□ -0.33
PTPRF-211ENST00000467464 MTCL1Q9Y4B5 1905 aaKnown RBP13□□□□□ -0.33
PTPRF-211ENST00000467464 COL4A3Q01955 1670 aa12.99□□□□□ -0.33
PTPRF-211ENST00000467464 PIRO00625 290 aa12.99□□□□□ -0.33
PTPRF-211ENST00000467464 PRRG1O14668 218 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms