RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 RTN2O75298 545 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 ABL1P00519 1130 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 KRT5P13647 590 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 P4HA1P13674 534 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 USP8P40818 1118 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 ZBTB6Q15916 424 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 GPIHBP1Q8IV16 184 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 RPUSD2Q8IZ73 545 aaKnown RBP10.13□□□□□ -0.79
PRPF3-202ENST00000467329 USP38Q8NB14 1042 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 PPP1R13LQ8WUF5 828 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 SLC20A1Q8WUM9 679 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 FAM84AQ96KN4 292 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 EIF2AQ9BY44 585 aaKnown RBP10.13□□□□□ -0.79
PRPF3-202ENST00000467329 IRX2Q9BZI1 471 aaPredicted RBP10.13□□□□□ -0.79
PRPF3-202ENST00000467329 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.13□□□□□ -0.79
PRPF3-202ENST00000467329 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
PRPF3-202ENST00000467329 NOC2LQ9Y3T9 749 aaKnown RBP10.13□□□□□ -0.79
PRPF3-202ENST00000467329 CITO14578 2027 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 ANKRD62A6NC57 917 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 GPR182O15218 404 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 XPOTO43592 962 aaKnown RBP10.12□□□□□ -0.79
PRPF3-202ENST00000467329 CST3P01034 146 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-202ENST00000467329 CYP3A5P20815 502 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 HADHBP55084 474 aaKnown RBP10.12□□□□□ -0.79
PRPF3-202ENST00000467329 FMO1Q01740 532 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 ZNF667Q5HYK9 610 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 PAPD7Q5XG87 772 aaKnown RBP10.12□□□□□ -0.79
PRPF3-202ENST00000467329 SPOPLQ6IQ16 392 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 LRRC52Q8N7C0 313 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 BEST2Q8NFU1 509 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 BEGAINQ9BUH8 593 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 TRAIPQ9BWF2 469 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 TRIM6Q9C030 488 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-202ENST00000467329 ERVK-5Q9HDB9 667 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 DPP3Q9NY33 737 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 SNTG2Q9NY99 539 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 JRKLQ9Y4A0 524 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 TRIM17Q9Y577 477 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 PCDHB4Q9Y5E5 795 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 PCDHGC5Q9Y5F6 944 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-202ENST00000467329 RPS6KA5O75582 802 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 CHRNA1P02708 482 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 ASPAP45381 313 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 RAB27AP51159 221 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 SLC47A2Q86VL8 602 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 RBBP8NLQ8NC74 664 aaPredicted RBP10.12□□□□□ -0.79
PRPF3-202ENST00000467329 KIF12Q96FN5 646 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 UBQLN1Q9UMX0 589 aaKnown RBP10.12□□□□□ -0.79
PRPF3-202ENST00000467329 PTPN22Q9Y2R2 807 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 MRFAP1Q9Y605 127 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 UMODL1Q5DID0 1318 aa10.12□□□□□ -0.79
PRPF3-202ENST00000467329 MACROD2A1Z1Q3 448 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 KBTBD13C9JR72 458 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 RECQL4O94761 1208 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 URI1O94763 535 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-202ENST00000467329 CD4P01730 458 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 PRLRP16471 622 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 GALCP54803 685 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 HTRA3P83110 453 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 AMPD2Q01433 879 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 WHAMMP3Q1A5X7 153 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 CLEC16AQ2KHT3 1053 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 FBXO47Q5MNV8 452 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 CTNNBL1Q8WYA6 563 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-202ENST00000467329 RFFLQ8WZ73 363 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 WNT8BQ93098 351 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 TRIM11Q96F44 468 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 ARID3AQ99856 593 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 PACSIN1Q9BY11 444 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 NXF3Q9H4D5 531 aaKnown RBP10.11□□□□□ -0.79
PRPF3-202ENST00000467329 TFR2Q9UP52 801 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 DUSP10Q9Y6W6 482 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 A0A1W2PQ45 241 aaPredicted RBP10.11□□□□□ -0.79
PRPF3-202ENST00000467329 A0A1W2PQY0 241 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 DNM1LO00429 736 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 MTA2O94776 668 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 SLU7O95391 586 aaKnown RBP10.11□□□□□ -0.79
PRPF3-202ENST00000467329 ITGB3P05106 788 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 PAEPP09466 180 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 RHOT2Q8IXI1 618 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 PCDHB18PQ96TA0 734 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.11□□□□□ -0.79
PRPF3-202ENST00000467329 CDC23Q9UJX2 597 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 ST3GAL5Q9UNP4 418 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 IPPQ9Y573 584 aa10.11□□□□□ -0.79
PRPF3-202ENST00000467329 CTIFO43310 598 aaKnown RBP10.1□□□□□ -0.79
PRPF3-202ENST00000467329 MOCS3O95396 460 aa10.1□□□□□ -0.79
PRPF3-202ENST00000467329 LSM8O95777 96 aaKnown RBP10.1□□□□□ -0.79
PRPF3-202ENST00000467329 MYBL1P10243 752 aa10.1□□□□□ -0.79
PRPF3-202ENST00000467329 SKIP12755 728 aa10.1□□□□□ -0.79
PRPF3-202ENST00000467329 POLR2BP30876 1174 aaKnown RBP10.1□□□□□ -0.79
PRPF3-202ENST00000467329 THPOP40225 353 aa10.1□□□□□ -0.79
PRPF3-202ENST00000467329 MYO1EQ12965 1108 aa10.1□□□□□ -0.79
PRPF3-202ENST00000467329 DSC3Q14574 896 aa10.1□□□□□ -0.79
PRPF3-202ENST00000467329 ACAD10Q6JQN1 1059 aa10.1□□□□□ -0.79
PRPF3-202ENST00000467329 MRPL10Q7Z7H8 261 aaKnown RBP10.1□□□□□ -0.79
PRPF3-202ENST00000467329 SMG8Q8ND04 991 aaKnown RBP10.1□□□□□ -0.79
PRPF3-202ENST00000467329 HPDLQ96IR7 371 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms