RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 FOXJ2Q9P0K8 574 aa6.33□□□□□ -1.4
ATG3-204ENST00000467275 MCM8Q9UJA3 840 aa6.33□□□□□ -1.4
ATG3-204ENST00000467275 MGST3O14880 152 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 HAUS5O94927 633 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 ZFPL1O95159 310 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 FCER1AP12319 257 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 CACNA2D1P54289 1103 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 SLFN5Q08AF3 891 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 PGM2L1Q6PCE3 622 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 MIGA2Q7L4E1 593 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 ZNF384Q8TF68 577 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 RAB24Q969Q5 203 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 TMX3Q96JJ7 454 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 PDLIM2Q96JY6 352 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 FAM126AQ9BYI3 521 aaPredicted RBP6.32□□□□□ -1.4
ATG3-204ENST00000467275 SEMA4GQ9NTN9 838 aa6.32□□□□□ -1.4
ATG3-204ENST00000467275 PHLDB1Q86UU1 1377 aa6.31□□□□□ -1.4
ATG3-204ENST00000467275 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
ATG3-204ENST00000467275 MTHFD1P11586 935 aaKnown RBP6.31□□□□□ -1.4
ATG3-204ENST00000467275 ACAP2Q15057 778 aa6.31□□□□□ -1.4
ATG3-204ENST00000467275 SF3B3Q15393 1217 aaKnown RBP6.31□□□□□ -1.4
ATG3-204ENST00000467275 SP5Q6BEB4 398 aaPredicted RBP6.31□□□□□ -1.4
ATG3-204ENST00000467275 CNTD1Q8N815 330 aa6.31□□□□□ -1.4
ATG3-204ENST00000467275 TMX1Q9H3N1 280 aa6.31□□□□□ -1.4
ATG3-204ENST00000467275 SLC5A4Q9NY91 659 aa6.31□□□□□ -1.4
ATG3-204ENST00000467275 SLC17A6Q9P2U8 582 aa6.31□□□□□ -1.4
ATG3-204ENST00000467275 AGFG2O95081 481 aa6.3□□□□□ -1.4
ATG3-204ENST00000467275 WASP42768 502 aa6.3□□□□□ -1.4
ATG3-204ENST00000467275 UTP14CQ5TAP6 766 aaKnown RBP6.3□□□□□ -1.4
ATG3-204ENST00000467275 DCBLD1Q8N8Z6 715 aa6.3□□□□□ -1.4
ATG3-204ENST00000467275 HDAC10Q969S8 669 aa6.3□□□□□ -1.4
ATG3-204ENST00000467275 TMEM125Q96AQ2 219 aa6.3□□□□□ -1.4
ATG3-204ENST00000467275 PUS7LQ9H0K6 701 aaKnown RBP6.3□□□□□ -1.4
ATG3-204ENST00000467275 MKS1Q9NXB0 559 aa6.3□□□□□ -1.4
ATG3-204ENST00000467275 CDYLQ9Y232 598 aa6.3□□□□□ -1.4
ATG3-204ENST00000467275 PCDHA13Q9Y5I0 950 aa6.3□□□□□ -1.4
ATG3-204ENST00000467275 GRM6O15303 877 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 YY2O15391 372 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 ORC4O43929 436 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 NDUFS2O75306 463 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 MATN4O95460 622 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 CDK4P11802 303 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 POU3F3P20264 500 aaPredicted RBP6.29□□□□□ -1.4
ATG3-204ENST00000467275 SLC6A4P31645 630 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 FOLR3P41439 243 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 SLC16A1P53985 500 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 CDC42EP1Q00587 391 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 FPGSQ05932 587 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 TARDBPQ13148 414 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATG3-204ENST00000467275 PABPC1LQ4VXU2 614 aaKnown RBP6.29□□□□□ -1.4
ATG3-204ENST00000467275 AKNAD1Q5T1N1 836 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 CLNKQ7Z7G1 428 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 Q8NA96 180 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 TLR10Q9BXR5 811 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 KLK15Q9H2R5 256 aa6.29□□□□□ -1.4
ATG3-204ENST00000467275 A0A1W2PS29 197 aa6.28□□□□□ -1.4
ATG3-204ENST00000467275 ZNF844Q08AG5 666 aa6.28□□□□□ -1.4
ATG3-204ENST00000467275 DDX42Q86XP3 938 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATG3-204ENST00000467275 JADE3Q92613 823 aa6.28□□□□□ -1.4
ATG3-204ENST00000467275 PACSIN1Q9BY11 444 aa6.28□□□□□ -1.4
ATG3-204ENST00000467275 INTS13Q9NVM9 706 aa6.28□□□□□ -1.4
ATG3-204ENST00000467275 ASB6Q9NWX5 421 aa6.28□□□□□ -1.4
ATG3-204ENST00000467275 PRAMEF33A0A0G2JMD5 474 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 PRAMEF10O60809 474 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 SBK3P0C264 359 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 SRGNP10124 158 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 KCNA2P16389 499 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 IARSP41252 1262 aaKnown RBP6.27□□□□□ -1.41
ATG3-204ENST00000467275 RPS7P62081 194 aaKnown RBP6.27□□□□□ -1.41
ATG3-204ENST00000467275 NHLH1Q02575 133 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 PREPLQ4J6C6 727 aaPredicted RBP6.27□□□□□ -1.41
ATG3-204ENST00000467275 KAZNQ674X7 775 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 C1orf162Q8NEQ5 155 aaPredicted RBP6.27□□□□□ -1.41
ATG3-204ENST00000467275 IFI44Q8TCB0 444 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 FBXL20Q96IG2 436 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 IL17RBQ9NRM6 502 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 TUBD1Q9UJT1 453 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 NEU2Q9Y3R4 380 aa6.27□□□□□ -1.41
ATG3-204ENST00000467275 CCDC151A5D8V7 595 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 LRRC3CA6NJW4 275 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 C1QL1O75973 258 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 MT-CO1P00395 513 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 CD300EQ496F6 205 aaPredicted RBP6.26□□□□□ -1.41
ATG3-204ENST00000467275 EGFLAMQ63HQ2 1017 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 VWA1Q6PCB0 445 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 GADL1Q6ZQY3 521 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 NECAB2Q7Z6G3 386 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 GRASPQ7Z6J2 395 aaPredicted RBP6.26□□□□□ -1.41
ATG3-204ENST00000467275 IL17RDQ8NFM7 739 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 JKAMPQ9P055 326 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 FRMD4BQ9Y2L6 1034 aa6.26□□□□□ -1.41
ATG3-204ENST00000467275 KLHL33A6NCF5 533 aa6.25□□□□□ -1.41
ATG3-204ENST00000467275 MPPED1O15442 326 aa6.25□□□□□ -1.41
ATG3-204ENST00000467275 XPOTO43592 962 aaKnown RBP6.25□□□□□ -1.41
ATG3-204ENST00000467275 SGTAO43765 313 aa6.25□□□□□ -1.41
ATG3-204ENST00000467275 CD1AP06126 327 aa6.25□□□□□ -1.41
ATG3-204ENST00000467275 C5AR1P21730 350 aa6.25□□□□□ -1.41
ATG3-204ENST00000467275 ZNF280AP59817 542 aaPredicted RBP6.25□□□□□ -1.41
ATG3-204ENST00000467275 RAB39AQ14964 217 aa6.25□□□□□ -1.41
ATG3-204ENST00000467275 INAVAQ3KP66 663 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms