RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 WDR18Q9BV38 432 aa16.5■□□□□ 0.23
CHD1L-205ENST00000467213 MRIQ9BWK5 157 aa16.5■□□□□ 0.23
CHD1L-205ENST00000467213 DRG1Q9Y295 367 aaKnown RBP16.5■□□□□ 0.23
CHD1L-205ENST00000467213 ALOX15BO15296 676 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 TM9SF1O15321 606 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 SMIM24O75264 130 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 PROSCO94903 275 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 RTN3O95197 1032 aaPredicted RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 TROVE2P10155 538 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 TSHRP16473 764 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 EPHB2P29323 1055 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 MORF4L2Q15014 288 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 TMED2Q15363 201 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 SMYD5Q6GMV2 418 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 FAM47EQ6ZV65 393 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 VCPIP1Q96JH7 1222 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 RIT2Q99578 217 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 VPS11Q9H270 941 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 TMEM8AQ9HCN3 771 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 HSPBP1Q9NZL4 362 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 ZNF212Q9UDV6 495 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 ENO4A6NNW6 628 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 ATMINO43313 823 aaPredicted RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 GCNT1Q02742 428 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 KRT39Q6A163 491 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 NLRP9Q7RTR0 991 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 RHOT1Q8IXI2 618 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 MCOLN2Q8IZK6 566 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 PARD3BQ8TEW8 1205 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 PTCD3Q96EY7 689 aaKnown RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 BTBD6Q96KE9 485 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 NR1H4Q96RI1 486 aaPredicted RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 UIMC1Q96RL1 719 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 ANKFY1Q9P2R3 1169 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 STX18Q9P2W9 335 aaKnown RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 DNAJB4Q9UDY4 337 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 SCOCQ9UIL1 159 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 ANAPC7Q9UJX3 599 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 ARHGEF35A5YM69 484 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 KCNQ2O43526 872 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 PTPN7P35236 360 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 GCLMP48507 274 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 SNX1Q13596 522 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 SLC5A9Q2M3M2 681 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 MUM1Q2TAK8 710 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 EFHC2Q5JST6 749 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 TMEM154Q6P9G4 183 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 TMEM179Q6ZVK1 233 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 KSR1Q8IVT5 923 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 ZNF75CPQ92670 426 aaPredicted RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 DDX43Q9NXZ2 648 aaKnown RBP16.49■□□□□ 0.23
CHD1L-205ENST00000467213 PDP2Q9P2J9 529 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 TBK1Q9UHD2 729 aa16.49■□□□□ 0.23
CHD1L-205ENST00000467213 BTAF1O14981 1849 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 PDLIM1O00151 329 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 LYPLA2O95372 231 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 CDC25CP30307 473 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 KPNB1Q14974 876 aaKnown RBP16.48■□□□□ 0.23
CHD1L-205ENST00000467213 TRIM68Q6AZZ1 485 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 OTOAQ7RTW8 1153 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 CPNE8Q86YQ8 564 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 ARHGAP18Q8N392 663 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 NMRK1Q9NWW6 199 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 PSMC3IPQ9P2W1 217 aaPredicted RBP16.48■□□□□ 0.23
CHD1L-205ENST00000467213 POLIQ9UNA4 740 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 SHOC2Q9UQ13 582 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 K7ENM7 598 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 GAS7O60861 476 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 PLS3P13797 630 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 SLC34A1Q06495 639 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 AP1B1Q10567 949 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 BIRC2Q13490 618 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 TAF1BQ53T94 588 aaPredicted RBP16.48■□□□□ 0.23
CHD1L-205ENST00000467213 EAPPQ56P03 285 aaPredicted RBP16.48■□□□□ 0.23
CHD1L-205ENST00000467213 THEMIS2Q5TEJ8 643 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHD1L-205ENST00000467213 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 PLEKHO2Q8TD55 490 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 ZBTB10Q96DT7 871 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 NT5C1BQ96P26 610 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 DHRS4Q9BTZ2 278 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 DEFB129Q9H1M3 183 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 SYNCQ9H7C4 482 aa16.48■□□□□ 0.23
CHD1L-205ENST00000467213 MAGEA13PA6NCF6 341 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 F8W8V4 182 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 GNAT1P11488 350 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 CETN2P41208 172 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 BPIFB4P59827 614 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 TRIM72Q6ZMU5 477 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 USP37Q86T82 979 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 ATG4AQ8WYN0 398 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 ARHGEF1Q92888 912 aaKnown RBP16.47■□□□□ 0.23
CHD1L-205ENST00000467213 GPR101Q96P66 508 aaPredicted RBP16.47■□□□□ 0.23
CHD1L-205ENST00000467213 GRID1Q9ULK0 1009 aa16.47■□□□□ 0.23
CHD1L-205ENST00000467213 UMODL1Q5DID0 1318 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms