RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
NUP188-204ENST00000467044 ANO9A1A5B4 782 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 PODXLO00592 558 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 ZC3H11AO75152 810 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUP188-204ENST00000467044 GJB5O95377 273 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 ALDH2P05091 517 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 LRPAP1P30533 357 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 ATICP31939 592 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 RPL9P32969 192 aaKnown RBP11.56□□□□□ -0.56
NUP188-204ENST00000467044 SCN1AP35498 2009 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 CLCNKBP51801 687 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 APBA1Q02410 837 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 MYO1EQ12965 1108 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 ZNF699Q32M78 642 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 SPOPLQ6IQ16 392 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 TRIM65Q6PJ69 517 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 HERC6Q8IVU3 1022 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 VSTM4Q8IW00 320 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 COLGALT2Q8IYK4 626 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 LRRC43Q8N309 656 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 SPC24Q8NBT2 197 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 LMO3Q8TAP4 145 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 PHOSPHO2Q8TCD6 241 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 RSPH1Q8WYR4 309 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 TATDN2Q93075 761 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 ZNF689Q96CS4 500 aaPredicted RBP11.56□□□□□ -0.56
NUP188-204ENST00000467044 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
NUP188-204ENST00000467044 HPDLQ96IR7 371 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 UROC1Q96N76 676 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 NT5C1BQ96P26 610 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 PAAF1Q9BRP4 392 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 HCSTQ9UBK5 93 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 NXF1Q9UBU9 619 aaKnown RBP11.56□□□□□ -0.56
NUP188-204ENST00000467044 DNAJB4Q9UDY4 337 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 SIK3Q9Y2K2 1263 aa11.56□□□□□ -0.56
NUP188-204ENST00000467044 PIRO00625 290 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 TLL1O43897 1013 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 B4GALT3O60512 393 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 B3GAT3O94766 335 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 ASS1P00966 412 aaKnown RBP11.55□□□□□ -0.56
NUP188-204ENST00000467044 TRIM21P19474 475 aaKnown RBP11.55□□□□□ -0.56
NUP188-204ENST00000467044 PBX1P40424 430 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 TAF6P49848 677 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 NOP14P78316 857 aaKnown RBP11.55□□□□□ -0.56
NUP188-204ENST00000467044 DSC1Q08554 894 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 UPP1Q16831 310 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 SV2CQ496J9 727 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 ZNF667Q5HYK9 610 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 KLHDC7AQ5VTJ3 777 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 SPECC1LQ69YQ0 1117 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 GJB7Q6PEY0 223 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 DCLRE1AQ6PJP8 1040 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 RRAGAQ7L523 313 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 CACNA2D4Q7Z3S7 1137 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 PPFIBP1Q86W92 1011 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 CMTR2Q8IYT2 770 aaKnown RBP11.55□□□□□ -0.56
NUP188-204ENST00000467044 PPM1KQ8N3J5 372 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 LRRC52Q8N7C0 313 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 CXorf38Q8TB03 319 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 CPLX3Q8WVH0 158 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 TAF4BQ92750 862 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 ZNF560Q96MR9 790 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 RAD9AQ99638 391 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 GDF15Q99988 308 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 UBE2TQ9NPD8 197 aaPredicted RBP11.55□□□□□ -0.56
NUP188-204ENST00000467044 FAN1Q9Y2M0 1017 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 PRG3Q9Y2Y8 225 aaPredicted RBP11.55□□□□□ -0.56
NUP188-204ENST00000467044 INSL6Q9Y581 213 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 NUB1Q9Y5A7 615 aa11.55□□□□□ -0.56
NUP188-204ENST00000467044 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.55□□□□□ -0.564e-6■■□□□ 11.7
NUP188-204ENST00000467044 NT5C1B-RDH14C9J2C7 533 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 NRP1O14786 923 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 TADA2AO75478 443 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 P4HA1P13674 534 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 IGFBP6P24592 240 aaPredicted RBP11.54□□□□□ -0.56
NUP188-204ENST00000467044 CDC25BP30305 580 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 PNPLA4P41247 253 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 SLC11A1P49279 550 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 BCAR1P56945 870 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 POLR2FP61218 127 aaKnown RBP11.54□□□□□ -0.56
NUP188-204ENST00000467044 TNNC1P63316 161 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 HTRA4P83105 476 aaPredicted RBP11.54□□□□□ -0.56
NUP188-204ENST00000467044 ARHGAP44Q17R89 818 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 WDR72Q3MJ13 1102 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 RASIP1Q5U651 963 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 DSTYKQ6XUX3 929 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 SCARA5Q6ZMJ2 495 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.54□□□□□ -0.56
NUP188-204ENST00000467044 ARHGEF19Q8IW93 802 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 FIBCD1Q8N539 461 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 HASPINQ8TF76 798 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 MMS19Q96T76 1030 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 TMEM175Q9BSA9 504 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 COLEC11Q9BWP8 271 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 XYLT2Q9H1B5 865 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 CWH43Q9H720 699 aa11.54□□□□□ -0.56
NUP188-204ENST00000467044 APOBEC3GQ9HC16 384 aaKnown RBP11.54□□□□□ -0.56
NUP188-204ENST00000467044 SIX2Q9NPC8 291 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms