RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 ERCC4Q92889 916 aaPredicted RBP8.37□□□□□ -1.07
THBS3-205ENST00000465596 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 CLSTN3Q9BQT9 956 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 FAM213AQ9BRX8 229 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 PCIF1Q9H4Z3 704 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 TLE6Q9H808 572 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 RPF1Q9H9Y2 349 aaKnown RBP8.37□□□□□ -1.07
THBS3-205ENST00000465596 EXOC1Q9NV70 894 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 SLC38A7Q9NVC3 462 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 CLDND1Q9NY35 253 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 FNIP2Q9P278 1114 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 PUF60Q9UHX1 559 aaKnown RBP8.37□□□□□ -1.07
THBS3-205ENST00000465596 CDH22Q9UJ99 828 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 UBQLN1Q9UMX0 589 aaKnown RBP8.37□□□□□ -1.07
THBS3-205ENST00000465596 TRAF3IP3Q9Y228 551 aa8.37□□□□□ -1.07
THBS3-205ENST00000465596 PDXKO00764 312 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 KIAA0391O15091 583 aaKnown RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 CLIC2O15247 247 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 MBTPS2O43462 519 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 NCK2O43639 380 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 B3GAT3O94766 335 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 IL18RAPO95256 599 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 URODP06132 367 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 IL9P15248 144 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 RPL17P18621 184 aaKnown RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 CASP4P49662 377 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 UBE2HP62256 183 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 MRPS5P82675 430 aaKnown RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 TMEM132DQ14C87 1099 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 SNRNP35Q16560 246 aaKnown RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 TJAP1Q5JTD0 557 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 FAM171A1Q5VUB5 890 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 C9orf57Q5W0N0 161 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 SLC8B1Q6J4K2 584 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 ANKRD54Q6NXT1 300 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 ARMCX5Q6P1M9 558 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 NT5DC4Q86YG4 428 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 SMYD4Q8IYR2 804 aaPredicted RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 GUF1Q8N442 669 aaKnown RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 OR5B17Q8NGF7 314 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 ZNF516Q92618 1163 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 KIF12Q96FN5 646 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 MFSD14AQ96MC6 490 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 IPO9Q96P70 1041 aaKnown RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 RTP3Q9BQQ7 232 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 TTPALQ9BTX7 342 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 COL25A1Q9BXS0 654 aaPredicted RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 PDE11AQ9HCR9 933 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 CD320Q9NPF0 282 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 MRPL17Q9NRX2 175 aaKnown RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 LMBRD1Q9NUN5 540 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 RBAKQ9NYW8 714 aaPredicted RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 CGNQ9P2M7 1197 aaKnown RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 MTRRQ9UBK8 725 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 PCDHA5Q9Y5H7 936 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.36□□□□□ -1.07
THBS3-205ENST00000465596 COL4A3Q01955 1670 aa8.36□□□□□ -1.07
THBS3-205ENST00000465596 FRYLO94915 3013 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 FSD2A1L4K1 749 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 C19orf67A6NJJ6 358 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 C2CD2LO14523 706 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 SYN3O14994 580 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 TGM5O43548 720 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 TADA2AO75478 443 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 LDHAP00338 332 aaKnown RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 CD44P16070 742 aaKnown RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 MATR3P43243 847 aaKnown RBP eCLIP8.35□□□□□ -1.07
THBS3-205ENST00000465596 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 LILRA4P59901 499 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 CYP24A1Q07973 514 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 ELAVL2Q12926 359 aaKnown RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 SMAD4Q13485 552 aaKnown RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 PSMD6Q15008 389 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 SMAD2Q15796 467 aaKnown RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 VARS2Q5ST30 1063 aaKnown RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 CENPPQ6IPU0 288 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 KANK3Q6NY19 840 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 STXBP4Q6ZWJ1 553 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 SYCP3Q8IZU3 236 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 BEST2Q8NFU1 509 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 RIN2Q8WYP3 895 aaPredicted RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 ZNF707Q96C28 371 aaPredicted RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 NECAB3Q96P71 396 aaPredicted RBP8.35□□□□□ -1.07
THBS3-205ENST00000465596 GSDMAQ96QA5 445 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 RHOBTB2Q9BYZ6 727 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 MTMR12Q9C0I1 747 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 IGFLR1Q9H665 355 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 INTS13Q9NVM9 706 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 FBXW11Q9UKB1 542 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 MAN1B1Q9UKM7 699 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 PCDHB8Q9UN66 801 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 BACE2Q9Y5Z0 518 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 KIAA1549LQ6ZVL6 1849 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 TICRRQ7Z2Z1 1910 aa8.35□□□□□ -1.07
THBS3-205ENST00000465596 AKAP3O75969 853 aa8.34□□□□□ -1.07
THBS3-205ENST00000465596 ABLIM3O94929 683 aa8.34□□□□□ -1.07
THBS3-205ENST00000465596 OAZ2O95190 189 aa8.34□□□□□ -1.07
THBS3-205ENST00000465596 NR3C1P04150 777 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms