RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 SIM1P81133 766 aaPredicted RBP16.68■□□□□ 0.26
NCSTN-210ENST00000465223 CACNB1Q02641 598 aaPredicted RBP16.68■□□□□ 0.26
NCSTN-210ENST00000465223 TWF1Q12792 350 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 XKR9Q5GH70 373 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 STXBP5Q5T5C0 1151 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 TTC22Q5TAA0 569 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 SLC8B1Q6J4K2 584 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 ELMOD1Q8N336 334 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 ETNPPLQ8TBG4 499 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 CCDC12Q8WUD4 166 aaPredicted RBP16.68■□□□□ 0.26
NCSTN-210ENST00000465223 PPME1Q9Y570 386 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 LAMA5O15230 3695 aa16.68■□□□□ 0.26
NCSTN-210ENST00000465223 HELZ2Q9BYK8 2649 aaKnown RBP16.67■□□□□ 0.26
NCSTN-210ENST00000465223 TMEM189-UBE2V1I3L0A0 370 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 TBX3O15119 743 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 MEFVO15553 781 aaPredicted RBP16.67■□□□□ 0.26
NCSTN-210ENST00000465223 RECQL4O94761 1208 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 GBP1P32455 592 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 EPHA5P54756 1037 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 TFDP1Q14186 410 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 MXD4Q14582 209 aaPredicted RBP16.67■□□□□ 0.26
NCSTN-210ENST00000465223 FSTL4Q6MZW2 842 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 CAMKK1Q8N5S9 505 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 C3orf58Q8NDZ4 430 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 TBCKQ8TEA7 893 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 LRIG1Q96JA1 1093 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 TMEM209Q96SK2 561 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 SLC32A1Q9H598 525 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 ASAH2Q9NR71 780 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 CACNA2D2Q9NY47 1150 aa16.67■□□□□ 0.26
NCSTN-210ENST00000465223 NUP210Q8TEM1 1887 aaPredicted RBP16.67■□□□□ 0.26
NCSTN-210ENST00000465223 A0A1W2PRU2 124 aa16.66■□□□□ 0.26
NCSTN-210ENST00000465223 FAM221BA6H8Z2 402 aa16.66■□□□□ 0.26
NCSTN-210ENST00000465223 ATG13O75143 517 aa16.66■□□□□ 0.26
NCSTN-210ENST00000465223 PRB1P04280 392 aa16.66■□□□□ 0.26
NCSTN-210ENST00000465223 YWHABP31946 246 aaKnown RBP16.66■□□□□ 0.26
NCSTN-210ENST00000465223 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
NCSTN-210ENST00000465223 GLRA4Q5JXX5 417 aa16.66■□□□□ 0.26
NCSTN-210ENST00000465223 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
NCSTN-210ENST00000465223 GLIS3Q8NEA6 775 aa16.66■□□□□ 0.26
NCSTN-210ENST00000465223 GOLGA2P5Q9HBQ8 144 aa16.66■□□□□ 0.26
NCSTN-210ENST00000465223 CACNA1EQ15878 2313 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 KLF18A0A0U1RQI7 1052 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 TTLL13PA6NNM8 815 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 RNF40O75150 1001 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 MAPK8P45983 427 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 FAM193AP78312 1265 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
NCSTN-210ENST00000465223 CREB3L3Q68CJ9 461 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 NOSTRINQ8IVI9 506 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 BICD2Q8TD16 824 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 GPR88Q9GZN0 384 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 RWDD1Q9H446 243 aaPredicted RBP16.65■□□□□ 0.26
NCSTN-210ENST00000465223 VAV3Q9UKW4 847 aa16.65■□□□□ 0.26
NCSTN-210ENST00000465223 CYP3A7-CYP3A51PA0A087WV96 503 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 DKC1O60832 514 aaKnown RBP eCLIP16.64■□□□□ 0.25
NCSTN-210ENST00000465223 EGFP01133 1207 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 P4HBP07237 508 aaKnown RBP16.64■□□□□ 0.25
NCSTN-210ENST00000465223 GLRA2P23416 452 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 CYP3A7P24462 503 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 UPP1Q16831 310 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 TMEM196Q5HYL7 178 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 PMS2CLQ68D20 193 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 CYP2U1Q7Z449 544 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 HAUS6Q7Z4H7 955 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 C4orf19Q8IY42 314 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 LEMD2Q8NC56 503 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 LXNQ9BS40 222 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 LRRC3Q9BY71 257 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
NCSTN-210ENST00000465223 RGL1Q9NZL6 768 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 FBXL5Q9UKA1 691 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 NAP1L2Q9ULW6 460 aaPredicted RBP16.64■□□□□ 0.25
NCSTN-210ENST00000465223 USP20Q9Y2K6 914 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 PLXNB3Q9ULL4 1909 aa16.64■□□□□ 0.25
NCSTN-210ENST00000465223 ADAMTS9Q9P2N4 1935 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 CCDC194A0A1B0GVG4 234 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 DPYSL4O14531 572 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 BCKDHBP21953 392 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 ARL2P36404 184 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 PPP2R5CQ13362 524 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 OTUD6AQ7L8S5 288 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 PIP4P1Q86T03 277 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 TMC8Q8IU68 726 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 PIGKQ92643 395 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 CHFRQ96EP1 664 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 LSG1Q9H089 658 aaKnown RBP16.63■□□□□ 0.25
NCSTN-210ENST00000465223 PDZD7Q9H5P4 517 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 GDAQ9Y2T3 454 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 FREM2Q5SZK8 3169 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 MYO16Q9Y6X6 1858 aa16.63■□□□□ 0.25
NCSTN-210ENST00000465223 MAST4O15021 2626 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
NCSTN-210ENST00000465223 SLC37A4O43826 429 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 DGKEP52429 567 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 EXOSC10Q01780 885 aaKnown RBP16.62■□□□□ 0.25
NCSTN-210ENST00000465223 GRSF1Q12849 480 aaKnown RBP eCLIP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms