RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 MTMR12Q9C0I1 747 aa29.87■■■□□ 2.37
CHRD-211ENST00000464833 NUB1Q9Y5A7 615 aa29.87■■■□□ 2.37
CHRD-211ENST00000464833 TRAPPC3O43617 180 aa29.86■■■□□ 2.37
CHRD-211ENST00000464833 DLATP10515 647 aaKnown RBP29.86■■■□□ 2.37
CHRD-211ENST00000464833 AARSP49588 968 aaKnown RBP eCLIP29.86■■■□□ 2.37
CHRD-211ENST00000464833 HYAL1Q12794 435 aa29.86■■■□□ 2.37
CHRD-211ENST00000464833 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.86■■■□□ 2.37
CHRD-211ENST00000464833 PARD3BQ8TEW8 1205 aa29.86■■■□□ 2.37
CHRD-211ENST00000464833 NELFBQ8WX92 580 aa29.86■■■□□ 2.37
CHRD-211ENST00000464833 PPM1EQ8WY54 764 aa29.86■■■□□ 2.37
CHRD-211ENST00000464833 PPP2R3CQ969Q6 453 aa29.86■■■□□ 2.37
CHRD-211ENST00000464833 FNBP1Q96RU3 617 aa29.86■■■□□ 2.37
CHRD-211ENST00000464833 POP1Q99575 1024 aaKnown RBP29.86■■■□□ 2.37
CHRD-211ENST00000464833 MRPL17Q9NRX2 175 aaKnown RBP29.86■■■□□ 2.37
CHRD-211ENST00000464833 CTNND2Q9UQB3 1225 aa29.86■■■□□ 2.37
CHRD-211ENST00000464833 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.85■■■□□ 2.37
CHRD-211ENST00000464833 I3L4J1 428 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 TMEM191BP0C7N4 346 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 FGFR3P22607 806 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 CLDN10P78369 228 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 FKBP3Q00688 224 aaKnown RBP29.85■■■□□ 2.37
CHRD-211ENST00000464833 DUOXA2Q1HG44 320 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 RTP2Q5QGT7 225 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 TTI2Q6NXR4 508 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 ANKRD36BP1Q96IX9 119 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 SUSD3Q96L08 255 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 TTPALQ9BTX7 342 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 MKNK1Q9BUB5 465 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 SIX4Q9UIU6 781 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 ITGA11Q9UKX5 1188 aa29.85■■■□□ 2.37
CHRD-211ENST00000464833 CETN3O15182 167 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 PSMC2P35998 433 aaKnown RBP29.84■■■□□ 2.37
CHRD-211ENST00000464833 PAK1Q13153 545 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 COL19A1Q14993 1142 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 DUSP6Q16828 381 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 KIAA1841Q6NSI8 718 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 FAM186BQ8IYM0 893 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 MLKLQ8NB16 471 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 TMC2Q8TDI7 906 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 EEF2KMTQ96G04 330 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 DUSP9Q99956 384 aaKnown RBP29.84■■■□□ 2.37
CHRD-211ENST00000464833 TLE6Q9H808 572 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 SSX2IPQ9Y2D8 614 aa29.84■■■□□ 2.37
CHRD-211ENST00000464833 C2CD2LO14523 706 aa29.83■■■□□ 2.37
CHRD-211ENST00000464833 ITGB3P05106 788 aa29.83■■■□□ 2.37
CHRD-211ENST00000464833 TNNI1P19237 187 aa29.83■■■□□ 2.37
CHRD-211ENST00000464833 GTF2F1P35269 517 aaKnown RBP eCLIP29.83■■■□□ 2.37
CHRD-211ENST00000464833 NRIP1P48552 1158 aa29.83■■■□□ 2.37
CHRD-211ENST00000464833 LILRA4P59901 499 aa29.83■■■□□ 2.37
CHRD-211ENST00000464833 MCCD1P59942 119 aaPredicted RBP29.83■■■□□ 2.37
CHRD-211ENST00000464833 CCDC183Q5T5S1 534 aa29.83■■■□□ 2.37
CHRD-211ENST00000464833 SCARA3Q6AZY7 606 aa29.83■■■□□ 2.37
CHRD-211ENST00000464833 ZNF516Q92618 1163 aa29.83■■■□□ 2.37
CHRD-211ENST00000464833 BICDL2A1A5D9 508 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 LRRIQ3A6PVS8 624 aaPredicted RBP29.82■■■□□ 2.36
CHRD-211ENST00000464833 PER2O15055 1255 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 SPTLC1O15269 473 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 TNNC2P02585 160 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 PAX3P23760 479 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 TKTP29401 623 aaKnown RBP29.82■■■□□ 2.36
CHRD-211ENST00000464833 POLR2BP30876 1174 aaKnown RBP29.82■■■□□ 2.36
CHRD-211ENST00000464833 INTS8Q75QN2 995 aaKnown RBP29.82■■■□□ 2.36
CHRD-211ENST00000464833 RBM23Q86U06 439 aaKnown RBP29.82■■■□□ 2.36
CHRD-211ENST00000464833 CSGALNACT2Q8N6G5 542 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 RIN2Q8WYP3 895 aaPredicted RBP29.82■■■□□ 2.36
CHRD-211ENST00000464833 PIK3R5Q8WYR1 880 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 BORCS6Q96GS4 357 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 CDCA3Q99618 268 aaPredicted RBP29.82■■■□□ 2.36
CHRD-211ENST00000464833 RXFP1Q9HBX9 757 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 TMEM63CQ9P1W3 806 aa29.82■■■□□ 2.36
CHRD-211ENST00000464833 M0QZQ0 153 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 SYN3O14994 580 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 CNPP09543 421 aaKnown RBP29.81■■■□□ 2.36
CHRD-211ENST00000464833 CA8P35219 290 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 NLRP12P59046 1061 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 DLG4P78352 724 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 ENPEPQ07075 957 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 DPCR1Q3MIW9 517 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 C1orf220Q5T0J3 134 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 TRAPPC11Q7Z392 1133 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 CEP57Q86XR8 500 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 AGAP1Q9UPQ3 857 aa29.81■■■□□ 2.36
CHRD-211ENST00000464833 SLC16A3O15427 465 aaKnown RBP29.8■■■□□ 2.36
CHRD-211ENST00000464833 TAF6P49848 677 aa29.8■■■□□ 2.36
CHRD-211ENST00000464833 VAMP7P51809 220 aa29.8■■■□□ 2.36
CHRD-211ENST00000464833 STX17P56962 302 aa29.8■■■□□ 2.36
CHRD-211ENST00000464833 PRSS55Q6UWB4 352 aaPredicted RBP29.8■■■□□ 2.36
CHRD-211ENST00000464833 LRRC52Q8N7C0 313 aa29.8■■■□□ 2.36
CHRD-211ENST00000464833 EFHBQ8N7U6 833 aa29.8■■■□□ 2.36
CHRD-211ENST00000464833 LNX1Q8TBB1 728 aaPredicted RBP29.8■■■□□ 2.36
CHRD-211ENST00000464833 ZNF560Q96MR9 790 aa29.8■■■□□ 2.36
CHRD-211ENST00000464833 KLHL5Q96PQ7 755 aa29.8■■■□□ 2.36
CHRD-211ENST00000464833 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.8■■■□□ 2.36
CHRD-211ENST00000464833 PCDHB8Q9UN66 801 aa29.8■■■□□ 2.36
CHRD-211ENST00000464833 NCK2O43639 380 aa29.79■■■□□ 2.36
CHRD-211ENST00000464833 CLASP2O75122 1294 aaKnown RBP29.79■■■□□ 2.36
CHRD-211ENST00000464833 EPB41P11171 864 aaKnown RBP29.79■■■□□ 2.36
CHRD-211ENST00000464833 PNPLA4P41247 253 aa29.79■■■□□ 2.36
CHRD-211ENST00000464833 AP3M2P53677 418 aa29.79■■■□□ 2.36
CHRD-211ENST00000464833 RBP5P82980 135 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms