RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 SF3B3Q15393 1217 aaKnown RBP4.2□□□□□ -1.74
GARNL3-213ENST00000464616 COLEC12Q5KU26 742 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 RNF219Q5W0B1 726 aaPredicted RBP4.2□□□□□ -1.74
GARNL3-213ENST00000464616 KCNK18Q7Z418 384 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 NECAB2Q7Z6G3 386 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 STRA8Q7Z7C7 330 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 CLNKQ7Z7G1 428 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 PPM1NQ8N819 430 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 PRPF38AQ8NAV1 312 aaKnown RBP4.2□□□□□ -1.74
GARNL3-213ENST00000464616 TOR1AIP2Q8NFQ8 470 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 ATL2Q8NHH9 583 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 WDR66Q8TBY9 1149 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 SSH3Q8TE77 659 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 SMG7Q92540 1137 aaKnown RBP4.2□□□□□ -1.74
GARNL3-213ENST00000464616 TMEM125Q96AQ2 219 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 PRDM13Q9H4Q3 707 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 NEU2Q9Y3R4 380 aa4.2□□□□□ -1.74
GARNL3-213ENST00000464616 COL11A2P13942 1736 aaPredicted RBP4.2□□□□□ -1.74
GARNL3-213ENST00000464616 HAUS5O94927 633 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 MTHFD1P11586 935 aaKnown RBP4.19□□□□□ -1.74
GARNL3-213ENST00000464616 PCSK1P29120 753 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 NOMO3P69849 1222 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 SRSF4Q08170 494 aaKnown RBP4.19□□□□□ -1.74
GARNL3-213ENST00000464616 PPP3CAQ08209 521 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 NOMO2Q5JPE7 1267 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 ZNF362Q5T0B9 420 aaPredicted RBP4.19□□□□□ -1.74
GARNL3-213ENST00000464616 MIGA2Q7L4E1 593 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 LNX2Q8N448 690 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 FUBP1Q96AE4 644 aaKnown RBP4.19□□□□□ -1.74
GARNL3-213ENST00000464616 NACC2Q96BF6 587 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 UROC1Q96N76 676 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 C11orf54Q9H0W9 315 aaPredicted RBP4.19□□□□□ -1.74
GARNL3-213ENST00000464616 VTA1Q9NP79 307 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 IL17RBQ9NRM6 502 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 HOMER2Q9NSB8 354 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 CCM2LQ9NUG4 571 aaPredicted RBP4.19□□□□□ -1.74
GARNL3-213ENST00000464616 TDP1Q9NUW8 608 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 INTS13Q9NVM9 706 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 SLC23A1Q9UHI7 598 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 SCOCQ9UIL1 159 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 INTUQ9ULD6 942 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 CDYLQ9Y232 598 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 FRMD4BQ9Y2L6 1034 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 ATP8A1Q9Y2Q0 1164 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 GPR45Q9Y5Y3 372 aa4.19□□□□□ -1.74
GARNL3-213ENST00000464616 POLR2AP24928 1970 aaKnown RBP4.18□□□□□ -1.74
GARNL3-213ENST00000464616 TOR1BO14657 336 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 PROP1O75360 226 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 MATN4O95460 622 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 ERBB2P04626 1255 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 RPS7P62081 194 aaKnown RBP4.18□□□□□ -1.74
GARNL3-213ENST00000464616 EXOSC10Q01780 885 aaKnown RBP4.18□□□□□ -1.74
GARNL3-213ENST00000464616 TSTD2Q5T7W7 516 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 SPATS2Q86XZ4 545 aaKnown RBP4.18□□□□□ -1.74
GARNL3-213ENST00000464616 FAM98AQ8NCA5 519 aaKnown RBP4.18□□□□□ -1.74
GARNL3-213ENST00000464616 GPATCH3Q96I76 525 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 TMX3Q96JJ7 454 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 PDLIM2Q96JY6 352 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 ORAI2Q96SN7 254 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 PACSIN1Q9BY11 444 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 KMT5AQ9NQR1 393 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 FOXJ2Q9P0K8 574 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 NR2E3Q9Y5X4 410 aa4.18□□□□□ -1.74
GARNL3-213ENST00000464616 LRRC3CA6NJW4 275 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 MGST3O14880 152 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 RPLP2P05387 115 aaKnown RBP4.17□□□□□ -1.74
GARNL3-213ENST00000464616 GPR3P46089 330 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 SLC16A1P53985 500 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 AMPD3Q01432 767 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 NHLH1Q02575 133 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 PIGFQ07326 219 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 HNRNPA0Q13151 305 aaKnown RBP4.17□□□□□ -1.74
GARNL3-213ENST00000464616 MTM1Q13496 603 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 SEPT2Q15019 361 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 NBPF8Q3BBV2 869 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 UTP14CQ5TAP6 766 aaKnown RBP4.17□□□□□ -1.74
GARNL3-213ENST00000464616 KIAA1614Q5VZ46 1190 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 GADL1Q6ZQY3 521 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 PTF1AQ7RTS3 328 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 AFAP1L2Q8N4X5 818 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 B3GALNT2Q8NCR0 500 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 TFAP2BQ92481 460 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 SNX19Q92543 992 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 DPF2Q92785 391 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 HOXB13Q92826 284 aaPredicted RBP4.17□□□□□ -1.74
GARNL3-213ENST00000464616 SLC2A13Q96QE2 648 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 HSFX1Q9UBD0 423 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 RNF7Q9UBF6 113 aa4.17□□□□□ -1.74
GARNL3-213ENST00000464616 PRAMEF33A0A0G2JMD5 474 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 CCDC78A2IDD5 438 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 WNT10BO00744 389 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 MPPED1O15442 326 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 PRAMEF10O60809 474 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 PRKD3O94806 890 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 AGFG2O95081 481 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 S100BP04271 92 aaPredicted RBP4.16□□□□□ -1.74
GARNL3-213ENST00000464616 FCER1AP12319 257 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 KCNA2P16389 499 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 GRIA3P42263 894 aa4.16□□□□□ -1.74
GARNL3-213ENST00000464616 SLC6A9P48067 706 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms