RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CCDC172P0C7W6 258 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 MXI1P50539 228 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 WNT7BP56706 349 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 FAM193AP78312 1265 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 SLC7A5Q01650 507 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 CETN1Q12798 172 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 SNX17Q15036 470 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 MTFR1Q15390 333 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 RPS6KA1Q15418 735 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 PTGISQ16647 500 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 CATSPER4Q7RTX7 472 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 THNSL1Q8IYQ7 743 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 CEP120Q8N960 986 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 AENQ8WTP8 325 aaKnown RBP15.59■□□□□ 0.09
COL5A1-205ENST00000464187 WNT8BQ93098 351 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 VIPAS39Q9H9C1 493 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 TOPORSQ9NS56 1045 aaPredicted RBP15.59■□□□□ 0.09
COL5A1-205ENST00000464187 CPSF3Q9UKF6 684 aaKnown RBP15.59■□□□□ 0.09
COL5A1-205ENST00000464187 PMM2O15305 246 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 CRYBB1P53674 252 aaPredicted RBP15.59■□□□□ 0.09
COL5A1-205ENST00000464187 GPS2Q13227 327 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 PCBP1Q15365 356 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL5A1-205ENST00000464187 KRT39Q6A163 491 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 C8orf74Q6P047 294 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 SLFN11Q7Z7L1 901 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 RSPH3Q86UC2 560 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 TAF4BQ92750 862 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 ZBTB9Q96C00 473 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 HINFPQ9BQA5 517 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 SELENOOQ9BVL4 669 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 UBE2TQ9NPD8 197 aaPredicted RBP15.59■□□□□ 0.09
COL5A1-205ENST00000464187 PAK6Q9NQU5 681 aaPredicted RBP15.59■□□□□ 0.09
COL5A1-205ENST00000464187 STXBP5LQ9Y2K9 1186 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 TRIP12Q14669 1992 aaPredicted RBP15.58■□□□□ 0.09
COL5A1-205ENST00000464187 A0A1W2PQ45 241 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-205ENST00000464187 A0A1W2PQY0 241 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 TMCO5BA8MYB1 307 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 TMEM253P0C7T8 217 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 TNNI1P19237 187 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 HOXA11P31270 313 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-205ENST00000464187 GTF2H1P32780 548 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 OSTNP61366 133 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 CLDN10P78369 228 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 ZNF771Q7L3S4 317 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-205ENST00000464187 PALB2Q86YC2 1186 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 BRSK2Q8IWQ3 736 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 CELF4Q9BZC1 486 aaKnown RBP15.58■□□□□ 0.08
COL5A1-205ENST00000464187 TMEM8AQ9HCN3 771 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 STIM2Q9P246 746 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 HPCAL4Q9UM19 191 aa15.58■□□□□ 0.08
COL5A1-205ENST00000464187 M0QZ92 97 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 KCNK3O14649 394 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 MCF2P10911 925 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 TNFRSF8P28908 595 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 MRPS6P82932 125 aaKnown RBP15.57■□□□□ 0.08
COL5A1-205ENST00000464187 PTPN11Q06124 597 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-205ENST00000464187 PTPROQ16827 1216 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 GLE1Q53GS7 698 aaKnown RBP15.57■□□□□ 0.08
COL5A1-205ENST00000464187 LMBRD2Q68DH5 695 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-205ENST00000464187 SV2AQ7L0J3 742 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 RPAINQ86UA6 219 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 USP38Q8NB14 1042 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 SLC20A1Q8WUM9 679 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 GDAP1L1Q96MZ0 367 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 DEFB118Q96PH6 123 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 ADPGKQ9BRR6 497 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 RNF208Q9H0X6 261 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 STARD7Q9NQZ5 370 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 TRMT13Q9NUP7 481 aaKnown RBP15.57■□□□□ 0.08
COL5A1-205ENST00000464187 TAS2R14Q9NYV8 317 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 KBTBD13C9JR72 458 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 RPLP2P05387 115 aaKnown RBP15.57■□□□□ 0.08
COL5A1-205ENST00000464187 TNFAIP3P21580 790 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 TMEM192Q8IY95 271 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 RFFLQ8WZ73 363 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 ZNF516Q92618 1163 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 KAT5Q92993 513 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 PBKQ96KB5 322 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 FAM84AQ96KN4 292 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 AGPAT1Q99943 283 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 ACBD3Q9H3P7 528 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 NOD1Q9Y239 953 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 CDY2AQ9Y6F7 541 aa15.57■□□□□ 0.08
COL5A1-205ENST00000464187 PTPRJQ12913 1337 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 CTSHP09668 335 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 CCL5P13501 91 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 AARSP49588 968 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL5A1-205ENST00000464187 NOTUMQ6P988 496 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 C15orf39Q6ZRI6 1047 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 PEX26Q7Z412 305 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 NT5DC3Q86UY8 548 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 CTNNBL1Q8WYA6 563 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-205ENST00000464187 SEMA4DQ92854 862 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 ARHGEF26Q96DR7 871 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 OSGEPQ9NPF4 335 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 SEPT11Q9NVA2 429 aaKnown RBP15.56■□□□□ 0.08
COL5A1-205ENST00000464187 TMEM59LQ9UK28 342 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 PHF24Q9UPV7 400 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 COQ4Q9Y3A0 265 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms