RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 LTV1Q96GA3 475 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 TBC1D10AQ9BXI6 508 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 TRIM31Q9BZY9 425 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 DNAI2Q9GZS0 605 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 EHD1Q9H4M9 534 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 AZI2Q9H6S1 392 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 XAB2Q9HCS7 855 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 DNAJC17Q9NVM6 304 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 TBCCD1Q9NVR7 557 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 QPCTLQ9NXS2 382 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 HOXC10Q9NYD6 342 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 CXXC1Q9P0U4 656 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 KLHL14Q9P2G3 628 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ADD3Q9UEY8 706 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 PRKAG3Q9UGI9 489 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ANGEL1Q9UNK9 670 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 SATB2Q9UPW6 733 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 COQ6Q9Y2Z9 468 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 A0A0G2JMZ2 1700 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 LOC105371267A0A1B0GV96 52 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 FUOMA2VDF0 154 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ZSCAN5BA6NJL1 495 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 A8MX80 341 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 GPR25O00155 361 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ADCY6O43306 1168 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 RNASEH1O60930 286 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 GLRX3O76003 335 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 CBX6O95503 412 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 CHEK2O96017 543 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ARL1P40616 181 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 IFI35P80217 286 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 SLC34A1Q06495 639 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 CLN3Q13286 438 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 RASA2Q15283 850 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 SF3B4Q15427 424 aaKnown RBP eCLIP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 CFAP221Q4G0U5 840 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 WDR44Q5JSH3 913 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 DAB2IPQ5VWQ8 1189 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ANO1Q5XXA6 986 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 SNRNP48Q6IEG0 339 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 KLHDC10Q6PID8 442 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 SHC4Q6S5L8 630 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF295-AS1Q8N0V1 137 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 MREGQ8N565 214 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ENDOVQ8N8Q3 282 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 C12orf50Q8NA57 414 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 BRSK1Q8TDC3 778 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 CDHR1Q96JP9 859 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 PHACTR3Q96KR7 559 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 C8orf48Q96LL4 319 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 MED15Q96RN5 788 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 COQ7Q99807 217 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 GRIP2Q9C0E4 1043 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 KIAA1683Q9H0B3 1180 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 MYLK2Q9H1R3 596 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 CLK4Q9HAZ1 481 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 WDR6Q9NNW5 1121 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 VTA1Q9NP79 307 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 KCNH3Q9ULD8 1083 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ABT1Q9ULW3 272 aaKnown RBP3.82□□□□□ -1.8
COL8A1-205ENST00000463753 NOD1Q9Y239 953 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 ARL2BPQ9Y2Y0 163 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 COL4A3Q01955 1670 aa3.82□□□□□ -1.8
COL8A1-205ENST00000463753 TAF1P21675 1872 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TTC26A0AVF1 554 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 RGS16O15492 202 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ACSL4O60488 711 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TBX10O75333 385 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GUCY1B2O75343 617 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GMNNO75496 209 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ATG7O95352 703 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CTDNEP1O95476 244 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 FYNP06241 537 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PABPC4LP0CB38 370 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ESRRAP11474 423 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TCP1P17987 556 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ANXA13P27216 316 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TNFRSF8P28908 595 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PCSK6P29122 969 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CASP1P29466 404 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CYLC1P35663 651 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 AFMP43652 599 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 STT3AP46977 705 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PLCD1P51178 756 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GPC3P51654 580 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NOP14P78316 857 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 OCRLQ01968 901 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 DSG1Q02413 1049 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SPA17Q15506 151 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GSTA3Q16772 222 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TMEM266Q2M3C6 531 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TMEM31Q5JXX7 168 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TRAPPC3LQ5T215 181 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NLRP9Q7RTR0 991 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MIER3Q7Z3K6 550 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CLVS1Q8IUQ0 354 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ZBED8Q8IZ13 594 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 DEPDC4Q8N2C3 294 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 AGGF1Q8N302 714 aaeCLIP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TNIP2Q8NFZ5 429 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms