RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 TRIM65Q6PJ69 517 aa16.14■□□□□ 0.17
ABCF3-204ENST00000463685 DRC7Q8IY82 874 aa16.14■□□□□ 0.17
ABCF3-204ENST00000463685 XYLT2Q9H1B5 865 aa16.14■□□□□ 0.17
ABCF3-204ENST00000463685 NRDE2Q9H7Z3 1164 aa16.14■□□□□ 0.17
ABCF3-204ENST00000463685 RNF216Q9NWF9 866 aaPredicted RBP16.14■□□□□ 0.17
ABCF3-204ENST00000463685 DNAJB4Q9UDY4 337 aa16.14■□□□□ 0.17
ABCF3-204ENST00000463685 SCN1AP35498 2009 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 PODXLO00592 558 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 PIRO00625 290 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 NOL4O94818 638 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 GOLGA8FQ08AF8 430 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 GOLGA8DPQ0D2H9 430 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 TUSC3Q13454 348 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 ZNF699Q32M78 642 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 KLHDC7AQ5VTJ3 777 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 PHLDB3Q6NSJ2 640 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 RRAGAQ7L523 313 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 COLGALT2Q8IYK4 626 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 KAT5Q92993 513 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 HPDLQ96IR7 371 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 FAM193BQ96PV7 902 aaPredicted RBP16.13■□□□□ 0.17
ABCF3-204ENST00000463685 GANQ9H2C0 597 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 RC3H2Q9HBD1 1191 aaKnown RBP16.13■□□□□ 0.17
ABCF3-204ENST00000463685 KANSL3Q9P2N6 904 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 POLIQ9UNA4 740 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 NUB1Q9Y5A7 615 aa16.13■□□□□ 0.17
ABCF3-204ENST00000463685 TNRC18O15417 2968 aaPredicted RBP16.13■□□□□ 0.17
ABCF3-204ENST00000463685 RNF225M0QZC1 329 aaPredicted RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 SPTLC1O15269 473 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 ZC3H11AO75152 810 aaKnown RBP eCLIP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 ASS1P00966 412 aaKnown RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 ATP2A2P16615 1042 aaKnown RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 CDC25BP30305 580 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 LRPAP1P30533 357 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 PBX3P40426 434 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 NOP14P78316 857 aaKnown RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 DSC1Q08554 894 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 WDR44Q5JSH3 913 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 RASIP1Q5U651 963 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 SPECC1LQ69YQ0 1117 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 IQCEQ6IPM2 695 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 SCARA5Q6ZMJ2 495 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 GPIHBP1Q8IV16 184 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 HERC6Q8IVU3 1022 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 C3orf58Q8NDZ4 430 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 NEK11Q8NG66 645 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 HASPINQ8TF76 798 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 CPLX3Q8WVH0 158 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 ZNF689Q96CS4 500 aaPredicted RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 RNPC3Q96LT9 517 aaKnown RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 YME1L1Q96TA2 773 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 ZBED2Q9BTP6 218 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 UBE2OQ9C0C9 1292 aaKnown RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 NXF1Q9UBU9 619 aaKnown RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 PRG3Q9Y2Y8 225 aaPredicted RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 R3HCC1Q9Y3T6 440 aaKnown RBP16.12■□□□□ 0.17
ABCF3-204ENST00000463685 FHOD1Q9Y613 1164 aa16.12■□□□□ 0.17
ABCF3-204ENST00000463685 GJB5O95377 273 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 ITGB1P05556 798 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 RPL9P32969 192 aaKnown RBP16.11■□□□□ 0.17
ABCF3-204ENST00000463685 OR1G1P47890 313 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 SLC11A1P49279 550 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 RGS19P49795 217 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 RABGGTBP53611 331 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 POLR2FP61218 127 aaKnown RBP16.11■□□□□ 0.17
ABCF3-204ENST00000463685 BTG3Q14201 252 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-204ENST00000463685 UPP1Q16831 310 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 SGSM1Q2NKQ1 1148 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-204ENST00000463685 CD300LGQ6UXG3 332 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 LRRC43Q8N309 656 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 NT5C1BQ96P26 610 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 ARID3AQ99856 593 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 MRPL9Q9BYD2 267 aaKnown RBP16.11■□□□□ 0.17
ABCF3-204ENST00000463685 IMPG2Q9BZV3 1241 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 CWH43Q9H720 699 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 UBE2TQ9NPD8 197 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-204ENST00000463685 NLRC4Q9NPP4 1024 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 PLCB1Q9NQ66 1216 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 APEX2Q9UBZ4 518 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 MRPL42Q9Y6G3 142 aaKnown RBP16.11■□□□□ 0.17
ABCF3-204ENST00000463685 ITIH6Q6UXX5 1313 aa16.11■□□□□ 0.17
ABCF3-204ENST00000463685 GRXCR1A8MXD5 290 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 NT5C1B-RDH14C9J2C7 533 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 I3L4J1 428 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 KIF4AO95239 1232 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 GYPCP04921 128 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 TRIM21P19474 475 aaKnown RBP16.1■□□□□ 0.17
ABCF3-204ENST00000463685 ATICP31939 592 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 RAP1GAPP47736 663 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 TBX2Q13207 712 aaPredicted RBP16.1■□□□□ 0.17
ABCF3-204ENST00000463685 ARHGAP44Q17R89 818 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 SPOUT1Q5T280 376 aaKnown RBP16.1■□□□□ 0.17
ABCF3-204ENST00000463685 CMTR2Q8IYT2 770 aaKnown RBP16.1■□□□□ 0.17
ABCF3-204ENST00000463685 PPM1KQ8N3J5 372 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 LRRC52Q8N7C0 313 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 CCDC150Q8NCX0 1101 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
ABCF3-204ENST00000463685 KREMEN1Q96MU8 473 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 SLC9A7Q96T83 725 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms