RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 DAW1Q8N136 415 aa18.93■□□□□ 0.62
HMGN1-209ENST00000463631 DEPDC1BQ8WUY9 529 aa18.93■□□□□ 0.62
HMGN1-209ENST00000463631 SUSD3Q96L08 255 aa18.93■□□□□ 0.62
HMGN1-209ENST00000463631 POLD4Q9HCU8 107 aa18.93■□□□□ 0.62
HMGN1-209ENST00000463631 LRWD1Q9UFC0 647 aa18.93■□□□□ 0.62
HMGN1-209ENST00000463631 STK24Q9Y6E0 443 aa18.93■□□□□ 0.62
HMGN1-209ENST00000463631 PSMC3P17980 439 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 NEK4P51957 841 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 NRLP54845 237 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 MLLT6P55198 1093 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-209ENST00000463631 OSTNP61366 133 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 GUCY1B3Q02153 619 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 PDIA5Q14554 519 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 PPP2R5DQ14738 602 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 CYP4A22Q5TCH4 519 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 MPZL3Q6UWV2 235 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 VITQ6UXI7 678 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 ELMOD1Q8N336 334 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 C4orf32Q8N8J7 132 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 IGSF22Q8N9C0 903 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 C8orf76Q96K31 380 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 ACAP3Q96P50 834 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 C17orf75Q9HAS0 396 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 ZNF334Q9HCZ1 680 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-209ENST00000463631 DDX19AQ9NUU7 478 aaKnown RBP18.92■□□□□ 0.62
HMGN1-209ENST00000463631 AFF4Q9UHB7 1163 aaKnown RBP18.92■□□□□ 0.62
HMGN1-209ENST00000463631 KIAA1024Q9UPX6 916 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
HMGN1-209ENST00000463631 NUB1Q9Y5A7 615 aa18.92■□□□□ 0.62
HMGN1-209ENST00000463631 MAP1BP46821 2468 aaKnown RBP18.92■□□□□ 0.62
HMGN1-209ENST00000463631 CCDC169A6NNP5 214 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 NRG2O14511 850 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-209ENST00000463631 MEFVO15553 781 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-209ENST00000463631 MOSPD3O75425 235 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 ATXN1P54253 815 aaKnown RBP18.91■□□□□ 0.62
HMGN1-209ENST00000463631 PEX3P56589 373 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 CTXN3Q4LDR2 81 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 IQCEQ6IPM2 695 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 APPL2Q8NEU8 664 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 FBXO18Q8NFZ0 1043 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 DRC1Q96MC2 740 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 TARS2Q9BW92 718 aaKnown RBP18.91■□□□□ 0.62
HMGN1-209ENST00000463631 CEP72Q9P209 647 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 GMEB2Q9UKD1 530 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 CDV3Q9UKY7 258 aaKnown RBP18.91■□□□□ 0.62
HMGN1-209ENST00000463631 NDRG2Q9UN36 371 aaKnown RBP18.91■□□□□ 0.62
HMGN1-209ENST00000463631 PIAS3Q9Y6X2 628 aa18.91■□□□□ 0.62
HMGN1-209ENST00000463631 ARNTLO00327 626 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 HIP1RO75146 1068 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 CCR3P51677 355 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 ARPP19P56211 112 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 MAPK7Q13164 816 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 LAIR1Q6GTX8 287 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 BEST2Q8NFU1 509 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 SNX29Q8TEQ0 813 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 C18orf25Q96B23 403 aaPredicted RBP18.9■□□□□ 0.62
HMGN1-209ENST00000463631 MSANTD3Q96H12 275 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 ZSWIM3Q96MP5 696 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 LLPHQ9BRT6 129 aaKnown RBP18.9■□□□□ 0.62
HMGN1-209ENST00000463631 RTKNQ9BST9 563 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 RAB34Q9BZG1 259 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 KMT5AQ9NQR1 393 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 ASAH2Q9NR71 780 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 USP24Q9UPU5 2620 aa18.9■□□□□ 0.62
HMGN1-209ENST00000463631 LRP3O75074 770 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 GDI1P31150 447 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 MCM4P33991 863 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 C1orf228Q6PIY5 440 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 MFSD6LQ8IWD5 586 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 FAM3CQ92520 227 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 DDX12PQ92771 950 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 E2F7Q96AV8 911 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 ZNF512Q96ME7 567 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-209ENST00000463631 TBC1D32Q96NH3 1257 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 NTPCRQ9BSD7 190 aaKnown RBP18.89■□□□□ 0.61
HMGN1-209ENST00000463631 TCHPQ9BT92 498 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 TIPINQ9BVW5 301 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 OXCT2Q9BYC2 517 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-209ENST00000463631 GPR88Q9GZN0 384 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 PARD6AQ9NPB6 346 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 USP18Q9UMW8 372 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 PCDHB8Q9UN66 801 aa18.89■□□□□ 0.61
HMGN1-209ENST00000463631 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-209ENST00000463631 TOM1L1O75674 476 aa18.88■□□□□ 0.61
HMGN1-209ENST00000463631 TWF1Q12792 350 aa18.88■□□□□ 0.61
HMGN1-209ENST00000463631 NOLC1Q14978 699 aaKnown RBP eCLIP18.88■□□□□ 0.61
HMGN1-209ENST00000463631 HS6ST3Q8IZP7 471 aa18.88■□□□□ 0.61
HMGN1-209ENST00000463631 CELF5Q8N6W0 485 aaKnown RBP18.88■□□□□ 0.61
HMGN1-209ENST00000463631 ZSCAN18Q8TBC5 510 aaPredicted RBP18.88■□□□□ 0.61
HMGN1-209ENST00000463631 RUSC1Q9BVN2 902 aa18.88■□□□□ 0.61
HMGN1-209ENST00000463631 RAB23Q9ULC3 237 aa18.88■□□□□ 0.61
HMGN1-209ENST00000463631 NOL7Q9UMY1 257 aaKnown RBP18.88■□□□□ 0.61
HMGN1-209ENST00000463631 DNM3Q9UQ16 869 aa18.88■□□□□ 0.61
HMGN1-209ENST00000463631 NCANO14594 1321 aa18.88■□□□□ 0.61
HMGN1-209ENST00000463631 CEP295Q9C0D2 2601 aa18.87■□□□□ 0.61
HMGN1-209ENST00000463631 CNOT1A5YKK6 2376 aaKnown RBP18.87■□□□□ 0.61
HMGN1-209ENST00000463631 E9PMD0 336 aa18.87■□□□□ 0.61
HMGN1-209ENST00000463631 M0QZQ0 153 aa18.87■□□□□ 0.61
HMGN1-209ENST00000463631 LAD1O00515 517 aa18.87■□□□□ 0.61
HMGN1-209ENST00000463631 OAZ2O95190 189 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms