RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 K7ELQ4 463 aaPredicted RBP22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 XPOTO43592 962 aaKnown RBP22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 PAX3P23760 479 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 MARCKSP29966 332 aaPredicted RBP22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 MCM4P33991 863 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 TNFSF9P41273 254 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 MATR3P43243 847 aaKnown RBP eCLIP22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 NTHL1P78549 312 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 SLC39A14Q15043 492 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 ZNF280DQ6N043 979 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 KRI1Q8N9T8 703 aaKnown RBP22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 FGF13Q92913 245 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 HVCN1Q96D96 273 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 KIF12Q96FN5 646 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 STRA6Q9BX79 667 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 SEL1LQ9UBV2 794 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 FBXL21Q9UKT6 434 aa22.36■■□□□ 1.17
PDLIM4-205ENST00000463615 LACTBL1A8MY62 500 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 PPP1R37O75864 691 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 OAZ2O95190 189 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 NMT1P30419 496 aaKnown RBP22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 CTXN3Q4LDR2 81 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 PABPC1LQ4VXU2 614 aaKnown RBP22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 ZBTB41Q5SVQ8 909 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 FAM173BQ6P4H8 233 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 MTSS1LQ765P7 747 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 ZNF720Q7Z2F6 126 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 SIX5Q8N196 739 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 RTP3Q9BQQ7 232 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 MSTO1Q9BUK6 570 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 RPF1Q9H9Y2 349 aaKnown RBP22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 DERAQ9Y315 318 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 NUMBLQ9Y6R0 609 aa22.35■■□□□ 1.17
PDLIM4-205ENST00000463615 ELF1P32519 619 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 TXLNAP40222 546 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 SPECC1Q5M775 1068 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 SPATA1Q5VX52 437 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 RRAGBQ5VZM2 374 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 SLFN12LQ6IEE8 588 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 BEST2Q8NFU1 509 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 ITFG1Q8TB96 612 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 FGF14Q92915 247 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 CLIC6Q96NY7 704 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 HCFC1R1Q9NWW0 138 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 AFF4Q9UHB7 1163 aaKnown RBP22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 POLIQ9UNA4 740 aa22.34■■□□□ 1.17
PDLIM4-205ENST00000463615 KRBA1A5PL33 1030 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 STX6O43752 255 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 MICAL2O94851 1124 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 GAP43P17677 238 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 NASPP49321 788 aaPredicted RBP22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 NPAS3Q8IXF0 933 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 SNX21Q969T3 373 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 DNAJC19Q96DA6 116 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 USP28Q96RU2 1077 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 ZHX3Q9H4I2 956 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 ASB7Q9H672 318 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 GDE1Q9NZC3 331 aa22.33■■□□□ 1.17
PDLIM4-205ENST00000463615 ANKRD63C9JTQ0 380 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 SEC24AO95486 1093 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 LRG1P02750 347 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 RHOP08100 348 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 CFHP08603 1231 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 PTPN2P17706 415 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 TYMPP19971 482 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 SPAG1Q07617 926 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 ZC2HC1CQ53FD0 456 aaPredicted RBP22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 PHLDB3Q6NSJ2 640 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 PARM1Q6UWI2 310 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 CCDC73Q6ZRK6 1079 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 SV2BQ7L1I2 683 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 SFR1Q86XK3 245 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 FLCNQ8NFG4 579 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 GPR152Q8TDT2 470 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 PHOX2BQ99453 314 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 C2CD2Q9Y426 696 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 INSL5Q9Y5Q6 135 aa22.32■■□□□ 1.16
PDLIM4-205ENST00000463615 FRMD3A2A2Y4 597 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 MYMKA6NI61 221 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 PROB1E7EW31 1015 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 PRRG1O14668 218 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 PI15O43692 258 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 YWHAHQ04917 246 aaPredicted RBP22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 DYMQ7RTS9 669 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 CCDC105Q8IYK2 499 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 RPP25Q9BUL9 199 aaKnown RBP22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 CYP4F11Q9HBI6 524 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 OLFML3Q9NRN5 406 aa22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 MRPS23Q9Y3D9 190 aaKnown RBP22.31■■□□□ 1.16
PDLIM4-205ENST00000463615 ANO9A1A5B4 782 aa22.3■■□□□ 1.16
PDLIM4-205ENST00000463615 PIRO00625 290 aa22.3■■□□□ 1.16
PDLIM4-205ENST00000463615 LILRA4P59901 499 aa22.3■■□□□ 1.16
PDLIM4-205ENST00000463615 POSTNQ15063 836 aa22.3■■□□□ 1.16
PDLIM4-205ENST00000463615 SLC5A9Q2M3M2 681 aa22.3■■□□□ 1.16
PDLIM4-205ENST00000463615 PRSS36Q5K4E3 855 aa22.3■■□□□ 1.16
PDLIM4-205ENST00000463615 ADALQ6DHV7 355 aa22.3■■□□□ 1.16
PDLIM4-205ENST00000463615 JADE1Q6IE81 842 aa22.3■■□□□ 1.16
PDLIM4-205ENST00000463615 OR6C75A6NL08 312 aa22.29■■□□□ 1.16
PDLIM4-205ENST00000463615 H0Y858 1186 aa22.29■■□□□ 1.16
PDLIM4-205ENST00000463615 PDIA4P13667 645 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms